RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RHOP08100 348 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 RALGPS1Q5JS13 557 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 HAS3O00219 553 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 CDC7O00311 574 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 FAM58BPP0C7Q3 252 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 IDSP22304 550 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 GLDCP23378 1020 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 PRKD1Q15139 912 aaPredicted RBP17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 PDGFRLQ15198 375 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 PLEKHG6Q3KR16 790 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 SNAP47Q5SQN1 464 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 ZMIZ2Q8NF64 920 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 MTERF1Q99551 399 aaKnown RBP17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 SLCO3A1Q9UIG8 710 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 DLX3O60479 287 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 STC2O76061 302 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 ANPEPP15144 967 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 PITRM1Q5JRX3 1037 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 FBXW8Q8N3Y1 598 aa17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 CPSF7Q8N684 471 aaKnown RBP17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 NMD3Q96D46 503 aaKnown RBP17.77■□□□□ 0.44
PTPDC1-202ENST00000375360 RECQL5O94762 991 aaPredicted RBP17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 IVDP26440 423 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 GRM2Q14416 872 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 MYLK3Q32MK0 819 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 RINLQ6ZS11 566 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 PLD6Q8N2A8 252 aaKnown RBP17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 BEND7Q8N7W2 519 aaPredicted RBP17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 STARD8Q92502 1023 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 ZFYVE19Q96K21 471 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 RIPOR3Q96MK2 946 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 INTS10Q9NVR2 710 aaKnown RBP17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 TAS2R1Q9NYW7 299 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 U3KQV3 271 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 ZW10O43264 779 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 KDELR3O43731 214 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 SNUPNO95149 360 aaKnown RBP17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 PRKCHP24723 683 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 NTSP30990 170 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 UBE3AQ05086 875 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 SLC9B1Q4ZJI4 515 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 UBAP2Q5T6F2 1119 aaKnown RBP17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 METTL21CQ5VZV1 264 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 Q6ZVL8 140 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 PROX1Q92786 737 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 MOCOSQ96EN8 888 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 PTCD3Q96EY7 689 aaKnown RBP17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 FCRL3Q96P31 734 aaPredicted RBP17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 CXorf56Q9H5V9 222 aa17.77■□□□□ 0.43
PTPDC1-202ENST00000375360 DDX60Q8IY21 1712 aaKnown RBP17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 K7ERQ8 282 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 IFNA16P05015 189 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 GGT5P36269 586 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 NTHL1P78549 312 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 DPEP2Q9H4A9 486 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 CORO1CQ9ULV4 474 aaPredicted RBP17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 ERVW-1Q9UQF0 538 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 WNT9AO14904 365 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 IDH2P48735 452 aaKnown RBP17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 CCR4P51679 360 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 ZBTB6Q15916 424 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 ZNF549Q6P9A3 640 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 DCAF4L2Q8NA75 395 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 GUCY1B2O75343 617 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 TRBC1P01850 177 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 KELP23276 732 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 GDF5P43026 501 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 HK2P52789 917 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 MAPK10P53779 464 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 NAA20P61599 178 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 PAGE2Q7Z2X7 111 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 SCD5Q86SK9 330 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 GALNT13Q8IUC8 556 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 SORCS1Q8WY21 1168 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 DLG3Q92796 817 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 C1orf74Q96LT6 269 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 NUDT4Q9NZJ9 180 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 NHSQ6T4R5 1651 aa17.76■□□□□ 0.43
PTPDC1-202ENST00000375360 ECHS1P30084 290 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 DEFB103AP81534 67 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 NEDD8Q15843 81 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 EBPLQ9BY08 206 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 DENND2DQ9H6A0 471 aaPredicted RBP17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 REEP1Q9H902 201 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 DHRS12A0PJE2 317 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 MAFKO60675 156 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 ADAMTS4O75173 837 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 TLX1P31314 330 aaPredicted RBP17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 LRRC66Q68CR7 880 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 GPR141Q7Z602 305 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 CELF5Q8N6W0 485 aaKnown RBP17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 FEM1AQ9BSK4 669 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 RTKNQ9BST9 563 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 C9orf16Q9BUW7 83 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 CFAP20Q9Y6A4 193 aaKnown RBP17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 AK5Q9Y6K8 562 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 A8MT66 165 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 FAM220BPB1ANY3 271 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 HMGCS1Q01581 520 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 TAS1R1Q7RTX1 841 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms