RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 AGO3Q9H9G7 860 aaKnown RBP20.93■□□□□ 0.94
UPF3A-202ENST00000375299 AKIP1Q9NQ31 210 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 COMMD8Q9NX08 183 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 FNIP2Q9P278 1114 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 GBF1Q92538 1859 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 CCDC162PA2VCL2 907 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 MEIS3P2A8K0S8 358 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 G3V2T6 193 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 ECI2O75521 394 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 PTPRCAPQ14761 206 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 DPY19L1Q2PZI1 675 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 ANKRD13BQ86YJ7 626 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 PROKR1Q8TCW9 393 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 HMCESQ96FZ2 354 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 BTN2A3PQ96KV6 586 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 DERL2Q9GZP9 239 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 SYTL2Q9HCH5 934 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 TMEM45AQ9NWC5 275 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 IKZF3Q9UKT9 509 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 SNX5Q9Y5X3 404 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 F2P00734 622 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 GGT1P19440 569 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 MTPNP58546 118 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 PIGFQ07326 219 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 PRKG2Q13237 762 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 GRB14Q14449 540 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 CTU2Q2VPK5 515 aaKnown RBP20.92■□□□□ 0.94
UPF3A-202ENST00000375299 TMEM53Q6P2H8 277 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 DLEU7Q6UYE1 221 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 USP50Q70EL3 339 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-202ENST00000375299 MINDY2Q8NBR6 621 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 FATE1Q969F0 183 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 SMURF2Q9HAU4 748 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.92■□□□□ 0.94
UPF3A-202ENST00000375299 ZNF225Q9UK10 706 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 TRIP12Q14669 1992 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-202ENST00000375299 PATJQ8NI35 1801 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 LOC285095A0A1B0GVY8 99 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 AQP9O43315 295 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 XYLBO75191 536 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 UGT2B11O75310 529 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 DNAJB5O75953 348 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 ITIH1P19827 911 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 OGNP20774 298 aaKnown RBP20.92■□□□□ 0.94
UPF3A-202ENST00000375299 NRG1Q02297 640 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-202ENST00000375299 TOP3AQ13472 1001 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-202ENST00000375299 CCDC92Q53HC0 331 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-202ENST00000375299 SULT1C3Q6IMI6 304 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 FNDC5Q8NAU1 212 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 PPM1MQ96MI6 270 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 PSD2Q9BQI7 771 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 OSBPL10Q9BXB5 764 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 AMBRA1Q9C0C7 1298 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 SP110Q9HB58 689 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 LTB4R2Q9NPC1 389 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 CATSPERZQ9NTU4 200 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 ST14Q9Y5Y6 855 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 ARL5AQ9Y689 179 aa20.92■□□□□ 0.94
UPF3A-202ENST00000375299 JRKO75564 520 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 RPP40O75818 363 aaKnown RBP20.91■□□□□ 0.94
UPF3A-202ENST00000375299 NFKBIAP25963 317 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 TSNQ15631 228 aaKnown RBP20.91■□□□□ 0.94
UPF3A-202ENST00000375299 CTF1Q16619 201 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 C6orf136Q5SQH8 315 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 PERM1Q5SV97 790 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 FAM171BQ6P995 826 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 PAQR3Q6TCH7 311 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 UMODL1-AS1Q8N2C9 162 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 PJA1Q8NG27 643 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 TADA1Q96BN2 335 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 ACOX2Q99424 681 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 C1QTNF3Q9BXJ4 246 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 MTRRQ9UBK8 725 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 TMED5Q9Y3A6 229 aa20.91■□□□□ 0.94
UPF3A-202ENST00000375299 STX16O14662 325 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 RHOBTB1O94844 696 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 HAPLN1P10915 354 aaPredicted RBP20.9■□□□□ 0.94
UPF3A-202ENST00000375299 PIGAP37287 484 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 STC1P52823 247 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 CD47Q08722 323 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 RBBP7Q16576 425 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 OR13C4Q8NGS5 318 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 ARRDC2Q8TBH0 407 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 BLOC1S5Q8TDH9 187 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 S100ZQ8WXG8 99 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 PEX13Q92968 403 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 MS4A4AQ96JQ5 239 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 UGT2B28Q9BY64 529 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 TMLHEQ9NVH6 421 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 USE1Q9NZ43 259 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 PCTPQ9UKL6 214 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 SYCE1LA8MT33 242 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 MLYCDO95822 493 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 ALOX5P09917 674 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 AGXTP21549 392 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 PGFP49763 221 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 CRYBB1P53674 252 aaPredicted RBP20.9■□□□□ 0.94
UPF3A-202ENST00000375299 GP2P55259 537 aaKnown RBP20.9■□□□□ 0.94
UPF3A-202ENST00000375299 PPP2R2BQ00005 443 aa20.9■□□□□ 0.94
UPF3A-202ENST00000375299 UGT3A1Q6NUS8 523 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms