RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ADRB2P07550 413 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MBTD1Q05BQ5 628 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 SLC41A1Q8IVJ1 513 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MED8Q96G25 268 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MCUBQ9NWR8 336 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 FER1L4A9Z1Z3 1794 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 LACTBL1A8MY62 500 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CLDN11O75508 207 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CCNB2O95067 398 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 VNN2O95498 520 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CDC25CP30307 473 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 HNRNPFP52597 415 aaKnown RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 KIF18BQ86Y91 864 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 KCTD4Q8WVF5 259 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CSPG4P5Q96PW8 444 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CD93Q9NPY3 652 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 PNPOQ9NVS9 261 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 FAM159BA6NKW6 160 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 DNAJB6O75190 326 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 FMO4P31512 558 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 ZBTB6Q15916 424 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 SPPL2CQ8IUH8 684 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CPNE2Q96FN4 548 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 LMAN2LQ9H0V9 348 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 DCSTAMPQ9H295 470 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 TRIT1Q9H3H1 467 aaKnown RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MAGIXQ9H6Y5 334 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 DNMT3LQ9UJW3 386 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MRPS33Q9Y291 106 aaKnown RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CBX5P45973 191 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 CTC1Q2NKJ3 1217 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 RPTNQ6XPR3 784 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 RANBP3LQ86VV4 465 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 KBTBD7Q8WVZ9 684 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 STON2Q8WXE9 905 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 PPCDCQ96CD2 204 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 FTHL17Q9BXU8 183 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 RASSF1Q9NS23 344 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 RIIAD1A6NNX1 92 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 CD2P06729 351 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 ENO2P09104 434 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 PLEKHN1Q494U1 663 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 SERPINA13PQ6UXR4 307 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 APTXQ7Z2E3 356 aaKnown RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 TTLQ8NG68 377 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 TCEAL7Q9BRU2 100 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 ABHD16BQ9H3Z7 469 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 FAM50BQ9Y247 325 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 TESMINQ9Y4I5 508 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 DLDP09622 509 aaKnown RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 CBSLP0DN79 551 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 NR2F1P10589 423 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 CBSP35520 551 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 CLCQ05315 142 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 TPRG1LQ5T0D9 272 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 HJURPQ8NCD3 748 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 C1GALT1C1Q96EU7 318 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 GLOD4Q9HC38 313 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 ZMYM5Q9UJ78 669 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 UBR1Q8IWV7 1749 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 SLC12A8A0AV02 714 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 PSMD11O00231 422 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 RHAGQ02094 409 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 KCNA10Q16322 511 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 SETMARQ53H47 684 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 TAF8Q7Z7C8 310 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 CARNMT1Q8N4J0 409 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 NOTOA8MTQ0 251 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 HMGN1P05114 100 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 PRR5P85299 388 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 SREBF2Q12772 1141 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 HEPACAMQ14CZ8 416 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 MSANTD1Q6ZTZ1 278 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 FAM20CQ8IXL6 584 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF248Q8NDW4 579 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 TOR1AIP2Q8NFQ8 470 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 OR4A15Q8NGL6 344 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 SLC29A3Q9BZD2 475 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 ASB8Q9H765 288 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF358Q9NW07 568 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 DMAC2Q9NW81 257 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 OR1G1P47890 313 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 CLK3P49761 638 aaKnown RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 HACD4Q5VWC8 232 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 RPL13AP3Q6NVV1 102 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 MON1AQ86VX9 555 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 BRSK1Q8TDC3 778 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 COPS8Q99627 209 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 MECRQ9BV79 373 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 RUVBL1Q9Y265 456 aaKnown RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 PEX14O75381 377 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 TMEM209Q96SK2 561 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 SLA2Q9H6Q3 261 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 TLE6Q9H808 572 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 PCDHGA11Q9Y5H2 935 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 AKR1D1P51857 326 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 ATP6AP1Q15904 470 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 RNF19BQ6ZMZ0 732 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 PHACTR4Q8IZ21 702 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 GLT1D1Q96MS3 346 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms