RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ZBED5Q49AG3 693 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 BHLHB9Q6PI77 547 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 CLEC20AQ6ZU45 233 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ANKRD46Q86W74 232 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 CACUL1Q86Y37 369 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 PACRGLQ8N7B6 248 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ZFP28Q8NHY6 868 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 AP3S1Q92572 193 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 CCDC3Q9BQI4 270 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ERVK-6Q9BXR3 956 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ZBTB26Q9HCK0 441 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 MRPL39Q9NYK5 338 aaKnown RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 BAZ2AQ9UIF9 1905 aaKnown RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ZNF142P52746 1687 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 GLYATL1P3A0A0U1RQE8 302 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ATP6V1G1O75348 118 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 FABP3P05413 133 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 OR1D2P34982 312 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 IL10RBQ08334 325 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 GTF2H2Q13888 395 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 SIX1Q15475 284 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 GTF2H2CQ6P1K8 395 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ASZ1Q8WWH4 475 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 TOP1MTQ969P6 601 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 COL26A1Q96A83 441 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 NSMCE3Q96MG7 304 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 PEBP4Q96S96 227 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 TXLNGYQ9BZA5 131 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 AKTIPQ9H8T0 292 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 MRPL17Q9NRX2 175 aaKnown RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 NT5C1B-RDH14C9J2C7 533 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 TOR1BO14657 336 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 AIREO43918 545 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ESR1P03372 595 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 PSMA1P25786 263 aaKnown RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 CDH5P33151 784 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ERVK-8P63133 956 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 DEF8Q6ZN54 512 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ZDHHC21Q8IVQ6 265 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 FNDC11Q9BVV2 318 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 FAIM2Q9BWQ8 316 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 MAGEH1Q9H213 219 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 DNAJB9Q9UBS3 223 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 PADI3Q9ULW8 664 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 PSMD11O00231 422 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 CXCR6O00574 342 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ERAL1O75616 437 aaKnown RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 BCAS2O75934 225 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 PRAMEF1O95521 474 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ALDH4A1P30038 563 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 CACNG1Q06432 222 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 DAG1Q14118 895 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 C1orf220Q5T0J3 134 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 MFSD4BQ5TF39 518 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 DSG4Q86SJ6 1040 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 TCAIMQ8N3R3 496 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 GLB1L3Q8NCI6 653 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 C11orf65Q8NCR3 313 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 OR9I1Q8NGQ6 314 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 LRRC58Q96CX6 371 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 C1GALT1C1Q96EU7 318 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 ZNF607Q96SK3 696 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 TFB2MQ9H5Q4 396 aaKnown RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 RPRD1BQ9NQG5 326 aaKnown RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 RBMX2Q9Y388 322 aaKnown RBP11.43□□□□□ -0.58
PTCH1-203ENST00000375274 FPGTO14772 594 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 IRAK2O43187 625 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 SGCGQ13326 291 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 POM121L1PQ3SYA9 428 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 ZZZ3Q8IYH5 903 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 KLHL23Q8NBE8 558 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 OR52L1Q8NGH7 329 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 OR4A15Q8NGL6 344 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 CSGALNACT1Q8TDX6 532 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 FIZ1Q96SL8 496 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 CHCHD6Q9BRQ6 235 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 ACAT2Q9BWD1 397 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 ATG10Q9H0Y0 220 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 KAT8Q9H7Z6 458 aaKnown RBP11.42□□□□□ -0.58
PTCH1-203ENST00000375274 MIOSQ9NXC5 875 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 TUBA8Q9NY65 449 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-203ENST00000375274 FKBPLQ9UIM3 349 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 FAM234BA2RU67 622 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 OR51F1A6NGY5 319 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 AGRPO00253 132 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 TNFRSF11BO00300 401 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 FGF3P11487 239 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-203ENST00000375274 ASMTP46597 345 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 EEFSECP57772 596 aaKnown RBP11.42□□□□□ -0.58
PTCH1-203ENST00000375274 USP41Q3LFD5 358 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 RNF19BQ6ZMZ0 732 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 IZUMO1Q8IYV9 350 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 ZBTB2Q8N680 514 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 TRPV3Q8NET8 790 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 HAPLN3Q96S86 360 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 NMUR1Q9HB89 426 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 SIX4Q9UIU6 781 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 ARPC2O15144 300 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 INSIG1O15503 277 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms