RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ZBTB6Q15916 424 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 RALGPS2Q86X27 583 aaPredicted RBP14.2□□□□□ -0.14
TRAF1-201ENST00000373887 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRAF1-201ENST00000373887 COMMD3-BMI1R4GMX3 469 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 CCNDBP1O95273 360 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 CDH5P33151 784 aaPredicted RBP14.2□□□□□ -0.14
TRAF1-201ENST00000373887 GNALP38405 381 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 SNAPC1Q16533 368 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 RTL4Q6ZR62 310 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 FAM47BQ8NA70 645 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 PIK3C3Q8NEB9 887 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 CCDC54Q8NEL0 328 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 POF1BQ8WVV4 589 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 P2RY11Q96G91 374 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 TEFMQ96QE5 360 aaKnown RBP14.2□□□□□ -0.14
TRAF1-201ENST00000373887 PCDHB18PQ96TA0 734 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 NIFKQ9BYG3 293 aaKnown RBP14.2□□□□□ -0.14
TRAF1-201ENST00000373887 SLC39A8Q9C0K1 460 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 C2orf71A6NGG8 1288 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 H3BNH8 94 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 CILPO75339 1184 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 PRH1P02810 166 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 MXD1Q05195 221 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 PRKG2Q13237 762 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 C9orf64Q5T6V5 341 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 SNX20Q7Z614 316 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 MTMR14Q8NCE2 650 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 DNASE1L2Q92874 299 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 DIRAS2Q96HU8 199 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 COPS8Q99627 209 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 KCNS3Q9BQ31 491 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 CHIAQ9BZP6 476 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 PCDH18Q9HCL0 1135 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 SNX15Q9NRS6 342 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 RAP2CQ9Y3L5 183 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 RAI2Q9Y5P3 530 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 CLDN11O75508 207 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 THRBP10828 461 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 CDH13P55290 713 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 UBE2R2Q712K3 238 aaPredicted RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 MSL3Q8N5Y2 521 aaKnown RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 LMLNQ96KR4 655 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 CDH19Q9H159 772 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 RMI1Q9H9A7 625 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 BAIAP2Q9UQB8 552 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 DMTF1Q9Y222 760 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 FAM86C2PA6NEL3 165 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ARVCFO00192 962 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 MFSD11O43934 449 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 B4GALT4O60513 344 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 SLC22A3O75751 556 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ITGA2BP08514 1039 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 SNHG28P0DPA3 235 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 SDC2P34741 201 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 DSC2Q02487 901 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 GRSF1Q12849 480 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 LYPLAL1Q5VWZ2 237 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 SLC30A6Q6NXT4 461 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 VSTM1Q6UX27 236 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 MCEMP1Q8IX19 187 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 FAM81AQ8TBF8 368 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 PMEPA1Q969W9 287 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 C11orf84Q9BUA3 381 aaPredicted RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 RCCD1A6NED2 376 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 C4BPAP04003 597 aaKnown RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 AZGP1P25311 298 aaKnown RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 FBXO48Q5FWF7 155 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 BRMS1LQ5PSV4 323 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 TMPRSS11AQ6ZMR5 421 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 SLC9A9Q8IVB4 645 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ZNF366Q8N895 744 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ADCY4Q8NFM4 1077 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 SEMA3GQ9NS98 782 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 CICQ96RK0 1608 aaPredicted RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 FZD9O00144 591 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 TPD52L2O43399 206 aaKnown RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 CFIP05156 583 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 SERPINA6P08185 405 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ICAM3P32942 547 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ZNF132P52740 706 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 AUHQ13825 339 aaKnown RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 EGFLAMQ63HQ2 1017 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 VITQ6UXI7 678 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 GSTCDQ8NEC7 633 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 OR4K2Q8NGD2 314 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 OR52J3Q8NH60 311 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 TNFAIP8L1Q8WVP5 186 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 TBATAQ96M53 351 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 MED28Q9H204 178 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 IFT46Q9NQC8 304 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 GLYATL1P3A0A0U1RQE8 302 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 VIPP01282 170 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 CAP1Q01518 475 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ENPEPQ07075 957 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ZNF155Q12901 538 aaPredicted RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 SIM2Q14190 667 aaPredicted RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 C6orf52Q5T4I8 152 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 CREG2Q8IUH2 290 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ARMC10Q8N2F6 343 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 HMGB4Q8WW32 186 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms