RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 SOX17Q9H6I2 414 aaPredicted RBP13.05□□□□□ -0.32
NCDN-203ENST00000373253 MTRRQ9UBK8 725 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 STK39Q9UEW8 545 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 VPS4AQ9UN37 437 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 MYO10Q9HD67 2058 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 TGM5O43548 720 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 CPOXP36551 454 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 SNRPD1P62314 119 aaKnown RBP13.05□□□□□ -0.32
NCDN-203ENST00000373253 TUBB3Q13509 450 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 PTGR1Q14914 329 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 TRMT11Q7Z4G4 463 aaKnown RBP13.05□□□□□ -0.32
NCDN-203ENST00000373253 SYTL1Q8IYJ3 562 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 PARP8Q8N3A8 854 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 EBPLQ9BY08 206 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 DPY30Q9C005 99 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 CORO1CQ9ULV4 474 aaPredicted RBP13.05□□□□□ -0.32
NCDN-203ENST00000373253 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 TRIM38O00635 465 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 ULK1O75385 1050 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 ZNF682O95780 498 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 LYNP07948 512 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 HNF1BP35680 557 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 PLCL1Q15111 1095 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 AAK1Q2M2I8 961 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 LRRC66Q68CR7 880 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 CRTC3Q6UUV7 619 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 DPY19L3Q6ZPD9 716 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 Q6ZVL8 140 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 GRASPQ7Z6J2 395 aaPredicted RBP13.04□□□□□ -0.32
NCDN-203ENST00000373253 PGAM4Q8N0Y7 254 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 ZNF513Q8N8E2 541 aaPredicted RBP13.04□□□□□ -0.32
NCDN-203ENST00000373253 CCT7Q99832 543 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 OSGEPL1Q9H4B0 414 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 LIMD1Q9UGP4 676 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 BAG5Q9UL15 447 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 FFAR2O15552 330 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 TBC1D4O60343 1298 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 WDR47O94967 919 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 FKBP9O95302 570 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 ESRRBO95718 433 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 ADH1AP07327 375 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 PSMA4P25789 261 aaKnown RBP13.04□□□□□ -0.32
NCDN-203ENST00000373253 RAP1GDS1P52306 607 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 TGFBIQ15582 683 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 LY6G5CQ5SRR4 150 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 SLC2A7Q6PXP3 512 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 SLC39A5Q6ZMH5 540 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 FKBP9P1Q75LS8 142 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 OFCC1Q8IZS5 231 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 FOXJ1Q92949 421 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 FAM162AQ96A26 154 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 SDCCAG3Q96C92 435 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 AURKBQ96GD4 344 aaPredicted RBP13.04□□□□□ -0.32
NCDN-203ENST00000373253 MTERF1Q99551 399 aaKnown RBP13.04□□□□□ -0.32
NCDN-203ENST00000373253 SLAMF8Q9P0V8 285 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 ASB1Q9Y576 335 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 NPHS1O60500 1241 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 RPL10P27635 214 aaKnown RBP13.04□□□□□ -0.32
NCDN-203ENST00000373253 CST5P28325 142 aaPredicted RBP13.04□□□□□ -0.32
NCDN-203ENST00000373253 AQP1P29972 269 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 HTR7P34969 479 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 INPP5AQ14642 412 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 TTLL9Q3SXZ7 439 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 CHST14Q8NCH0 376 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 KLK6Q92876 244 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 APOLD1Q96LR9 279 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 CENPKQ9BS16 269 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 USP22Q9UPT9 525 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 TDRKHQ9Y2W6 561 aaKnown RBP13.04□□□□□ -0.32
NCDN-203ENST00000373253 COQ6Q9Y2Z9 468 aa13.04□□□□□ -0.32
NCDN-203ENST00000373253 SYNDIG1LA6NDD5 238 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 PRORSD1PA6NEY8 169 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 POLR2EP19388 210 aaKnown RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 BLMHQ13867 455 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 GK3PQ14409 553 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 SAMD4BQ5PRF9 694 aaKnown RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 IRGCQ6NXR0 463 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 RNF175Q8N4F7 328 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 GPR78Q96P69 363 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 GSTO2Q9H4Y5 243 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 FARSBQ9NSD9 589 aaKnown RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 RHBDL2Q9NX52 303 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 CACNA2D2Q9NY47 1150 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 SH3BP4Q9P0V3 963 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 POLG2Q9UHN1 485 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 CDH23Q9H251 3354 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 RNASEH1O60930 286 aaKnown RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 SLC22A3O75751 556 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 PEX11BO96011 259 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 GBAP04062 536 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 CLTBP09497 229 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 RPIAP49247 311 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 RING1Q06587 406 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 SYVN1Q86TM6 617 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 STK32CQ86UX6 486 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 COQ10BQ9H8M1 238 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 PCDH12Q9NPG4 1184 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 ZNF490Q9ULM2 529 aaPredicted RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 PSMD13Q9UNM6 376 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 GNG14A0A1W2PPG7 69 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms