RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 MKI67P46013 3256 aaKnown RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 ZNF839A8K0R7 811 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 HTRA2O43464 458 aaPredicted RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 DENRO43583 198 aaKnown RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 KIF1CO43896 1103 aaKnown RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 ZNF821O75541 412 aaPredicted RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 CAPNS1P04632 268 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 UFM1P61960 85 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 CDKL1Q00532 357 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 DGKKQ5KSL6 1271 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 CERS6Q6ZMG9 384 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 SLC15A3Q8IY34 581 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 FAM110BQ8TC76 370 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 MRPS31Q92665 395 aaKnown RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 GBP5Q96PP8 586 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 ZNF382Q96SR6 550 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 SMG9Q9H0W8 520 aaKnown RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 CMTM6Q9NX76 183 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 UBAP1Q9NZ09 502 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 INTS6Q9UL03 887 aaKnown RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 TMCO1Q9UM00 188 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 AP4B1Q9Y6B7 739 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 C15orf38-AP3S2A0A0A6YYH1 394 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 TGM5O43548 720 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 TRIM16O95361 564 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 ZNF7P17097 686 aaPredicted RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 PEX19P40855 299 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 CTSOP43234 321 aaPredicted RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 ZFP36L2P47974 494 aaKnown RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 NAA20P61599 178 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 NFATC2Q13469 925 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 CDKN3Q16667 212 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 C6orf52Q5T4I8 152 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 EFL1Q7Z2Z2 1120 aaKnown RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 ARPINQ7Z6K5 226 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 GRIN3AQ8TCU5 1115 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 PDLIM5Q96HC4 596 aaKnown RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 HOPXQ9BPY8 73 aaPredicted RBP18.5■□□□□ 0.55
USP49-202ENST00000373010 PIDD1Q9HB75 910 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 ABCD2Q9UBJ2 740 aa18.5■□□□□ 0.55
USP49-202ENST00000373010 LTBP2Q14767 1821 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 DOCK6Q96HP0 2047 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 ASPDHA6ND91 283 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 GOLGA8CPA6NN73 597 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 BAIAP3O94812 1187 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 CNPP09543 421 aaKnown RBP18.49■□□□□ 0.55
USP49-202ENST00000373010 PIM1P11309 404 aaPredicted RBP18.49■□□□□ 0.55
USP49-202ENST00000373010 BPIP17213 487 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 HTR6P50406 440 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 CHN2P52757 468 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 GK3PQ14409 553 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 GRM2Q14416 872 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 GOLGA7Q7Z5G4 137 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 TSPAN33Q86UF1 283 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 MINDY1Q8N5J2 469 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 ACDQ96AP0 544 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 LRRC58Q96CX6 371 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 HBEGFQ99075 208 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 TLR9Q9NR96 1032 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 EGFL7Q9UHF1 273 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 SNX13Q9Y5W8 968 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.49■□□□□ 0.55
USP49-202ENST00000373010 SLC25A14O95258 325 aaPredicted RBP18.49■□□□□ 0.55
USP49-202ENST00000373010 GUCA1CO95843 209 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 SLC6A2P23975 617 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 SLC7A1P30825 629 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 GRIA3P42263 894 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 STK19P49842 368 aaPredicted RBP18.49■□□□□ 0.55
USP49-202ENST00000373010 CHRNA6Q15825 494 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 PLEKHG6Q3KR16 790 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 HTR3DQ70Z44 454 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 SNX20Q7Z614 316 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 AMIGO2Q86SJ2 522 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 ST13P4Q8IZP2 240 aaPredicted RBP18.49■□□□□ 0.55
USP49-202ENST00000373010 MARVELD2Q8N4S9 558 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 EME1Q96AY2 570 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 CNOT6Q9ULM6 557 aaKnown RBP18.49■□□□□ 0.55
USP49-202ENST00000373010 RAB26Q9ULW5 256 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 MYOFQ9NZM1 2061 aa18.49■□□□□ 0.55
USP49-202ENST00000373010 PIKFYVEQ9Y2I7 2098 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 ABHD14A-ACY1A0A1B0GW23 586 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 A0A1W2PRU2 124 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 EME2A4GXA9 379 aaPredicted RBP18.48■□□□□ 0.55
USP49-202ENST00000373010 BNIP3LO60238 219 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 LILRB3O75022 631 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 KATNA1O75449 491 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 CAPN1P07384 714 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 HSPA8P11142 646 aaKnown RBP18.48■□□□□ 0.55
USP49-202ENST00000373010 ITGALP20701 1170 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 RPS3P23396 243 aaKnown RBP eCLIP18.48■□□□□ 0.55
USP49-202ENST00000373010 ITGB8P26012 769 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 GRIA2P42262 883 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 C6orf136Q5SQH8 315 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 PRMT9Q6P2P2 845 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 Q6ZSR9 355 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 ADAMTSL2Q86TH1 951 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 TMC8Q8IU68 726 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 RBFAQ8N0V3 343 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 FIBCD1Q8N539 461 aa18.48■□□□□ 0.55
USP49-202ENST00000373010 RIN3Q8TB24 985 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms