RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CNDP2Q96KP4 475 aaKnown RBP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 SYT15Q9BQS2 421 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 PCDHGB3Q9Y5G1 929 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 NOBOXO60393 691 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 TRBC1P01850 177 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 CYP11A1P05108 521 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 MATN1P21941 496 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 SEZ6Q53EL9 994 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 ACSBG2Q5FVE4 666 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 SLC16A9Q7RTY1 509 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 GTPBP3Q969Y2 492 aaKnown RBP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 KCNH4Q9UQ05 1017 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 MUSKO15146 869 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 ANXA3P12429 323 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 PSMA6P60900 246 aaKnown RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 SCGB2B2Q4G0G5 96 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 ZCCHC12Q6PEW1 402 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 FOXRED2Q8IWF2 684 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 SMG8Q8ND04 991 aaKnown RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 HDAC10Q969S8 669 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF347Q96SE7 839 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF334Q9HCZ1 680 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 KCTD5Q9NXV2 234 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 RASGEF1BQ0VAM2 473 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 BAATQ14032 418 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 C16orf86Q6ZW13 317 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 CHCHD4Q8N4Q1 142 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 SGCDQ92629 289 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 OIP5O43482 229 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 CPN2P22792 545 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 ALDH7A1P49419 539 aaKnown RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 TOB1P50616 345 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 TCEAL6Q6IPX3 200 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 TRAPPC5Q8IUR0 188 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 TMEM246Q9BRR3 403 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 B3GNT4Q9C0J1 378 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 LRRC4CQ9HCJ2 640 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 PRR12Q9ULL5 1215 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 CMAHPQ9Y471 501 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 SLC12A8A0AV02 714 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 FGF10O15520 208 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 PEX14O75381 377 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 NME6O75414 186 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 IFNA17P01571 189 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 FGBP02675 491 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 RPL22P35268 128 aaKnown RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 KLHL26Q53HC5 615 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 ARMC12Q5T9G4 340 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 SETD6Q8TBK2 473 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 FNDC8Q8TC99 324 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 PLEKHO2Q8TD55 490 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF512BQ96KM6 892 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 KLK14Q9P0G3 267 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 CTSHP09668 335 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 TBX4P57082 545 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 ASTE1Q2TB18 679 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 TMC8Q8IU68 726 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 TAS2R9Q9NYW1 312 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 H3BSA7 217 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 FARS2O95363 451 aaKnown RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 HSPA14Q0VDF9 509 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 MPPE1Q53F39 396 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 C1orf216Q8TAB5 229 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 PIGXQ8TBF5 258 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 RPL36Q9Y3U8 105 aaKnown RBP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 FAM205AQ6ZU69 1335 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 URADA6NGE7 173 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 CCNB2O95067 398 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 GJB6O95452 261 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 RAP2AP10114 183 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 KIR3DL1P43629 444 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 CPSF6Q16630 551 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL5A1-201ENST00000371817 MOXD1Q6UVY6 613 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 PRELID2Q8N945 189 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 ATAD1Q8NBU5 361 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 HCN3Q9P1Z3 774 aa15.13■□□□□ 0.01
COL5A1-201ENST00000371817 HSBP1L1C9JCN9 74 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 SLC22A2O15244 555 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 STAG3L1P0CL83 205 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 MPP1Q00013 466 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 MC1RQ01726 317 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 BCL2L1Q07817 233 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 SLC3A1Q07837 685 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 SLC13A2Q13183 592 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 FGL2Q14314 439 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF404Q494X3 552 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF627Q7L945 461 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 TMEM161BQ8NDZ6 487 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 GPRC5CQ9NQ84 441 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 PTBP2Q9UKA9 531 aaKnown RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 C13orf42A0A1B0GVH6 325 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 SIGLEC16A6NMB1 481 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 SLC9A3R1O14745 358 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 BANF1O75531 89 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 EIF4BP23588 611 aaKnown RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 MVKQ03426 396 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 ANKDD1AQ495B1 522 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 GCNT6Q5T4J0 391 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 TMEM214Q6NUQ4 689 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms