RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 C8AP07357 584 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 PCNAP12004 261 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 SLC2A4P14672 509 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 AKT1P31749 480 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 KCNK10P57789 538 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 ERVPABLB-1P60509 514 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 LAMB3Q13751 1172 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 MAPRE2Q15555 327 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 SLC2A7Q6PXP3 512 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 Q6ZVU0 165 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 RBM23Q86U06 439 aaKnown RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 TMEM25Q86YD3 366 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 SLC22A15Q8IZD6 547 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 ADAMTS19Q8TE59 1207 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 CYB5D2Q8WUJ1 264 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 GATA6Q92908 595 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 COQ10BQ9H8M1 238 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 WWOXQ9NZC7 414 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 MAP10Q9P2G4 905 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 KLQ9UEF7 1012 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 GON4LQ3T8J9 2241 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 SYCE1LA8MT33 242 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 AXIN1O15169 862 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 ABLIM3O94929 683 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 CLIC3O95833 236 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 GPX3P22352 226 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 HMOX2P30519 316 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 PLOD1Q02809 727 aaPredicted RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 PPP1R8Q12972 351 aaKnown RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 FOXB2Q5VYV0 432 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 NKAPQ8N5F7 415 aaKnown RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 PCYOX1LQ8NBM8 494 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 C2orf15Q8WU43 125 aaKnown RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 L3HYPDHQ96EM0 354 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 ZFRQ96KR1 1074 aaKnown RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 IPPKQ9H8X2 491 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 INTS10Q9NVR2 710 aaKnown RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 IL17CQ9P0M4 197 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 THSD7BQ9C0I4 1608 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 NPIPB15A6NHN6 443 aaPredicted RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 NME4O00746 187 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 BCAS2O75934 225 aaPredicted RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 ATP6V1B2P21281 511 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 ACVR1Q04771 509 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 TYSND1Q2T9J0 566 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 PAGE3Q5JUK9 113 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 SATL1Q86VE3 508 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 SLC39A11Q8N1S5 342 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 TTC30BQ8N4P2 665 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 BEND7Q8N7W2 519 aaPredicted RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 SCAMP4Q969E2 229 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 TRMOQ9BU70 441 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 DERL2Q9GZP9 239 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 INTS7Q9NVH2 962 aaKnown RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 SUN2Q9UH99 717 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 MBD1Q9UIS9 605 aaPredicted RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 ARIH1Q9Y4X5 557 aaPredicted RBP11.61□□□□□ -0.55
PDE6C-201ENST00000371447 BACE2Q9Y5Z0 518 aa11.61□□□□□ -0.55
PDE6C-201ENST00000371447 C15orf38-AP3S2A0A0A6YYH1 394 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 ACOT8O14734 319 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 PER2O15055 1255 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 TSPAN12O95859 305 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 CYBBP04839 570 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 NEK2P51955 445 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 MTPNP58546 118 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 COL9A2Q14055 689 aaPredicted RBP11.6□□□□□ -0.55
PDE6C-201ENST00000371447 ADGRE1Q14246 886 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 SLC14A2Q15849 920 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 ARPINQ7Z6K5 226 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 CRIPAKQ8N1N5 446 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 LMNTD1Q8N9Z9 388 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 OR10Q1Q8NGQ4 319 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 GPR150Q8NGU9 434 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 TOP1MTQ969P6 601 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 ULK4Q96C45 1275 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 ANKRD27Q96NW4 1050 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 SLC29A1Q99808 456 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 TBCDQ9BTW9 1192 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 PCTPQ9UKL6 214 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 INTS6Q9UL03 887 aaKnown RBP11.6□□□□□ -0.55
PDE6C-201ENST00000371447 POLR3HQ9Y535 204 aaPredicted RBP11.6□□□□□ -0.55
PDE6C-201ENST00000371447 HCFC2Q9Y5Z7 792 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 RNF103-CHMP3A0A140T963 221 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 FGF18O76093 207 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 BPIP17213 487 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 RPL38P63173 70 aaKnown RBP11.6□□□□□ -0.55
PDE6C-201ENST00000371447 DDX39BQ13838 428 aaKnown RBP11.6□□□□□ -0.55
PDE6C-201ENST00000371447 PTGR1Q14914 329 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 TBCELQ5QJ74 424 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 OR52E8Q6IFG1 317 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 CHST14Q8NCH0 376 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 OR4F6Q8NGB9 312 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 OR56A4Q8NGH8 313 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 FOXJ1Q92949 421 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 NMD3Q96D46 503 aaKnown RBP11.6□□□□□ -0.55
PDE6C-201ENST00000371447 SLC46A2Q9BY10 475 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 SOX17Q9H6I2 414 aaPredicted RBP11.6□□□□□ -0.55
PDE6C-201ENST00000371447 UBAP1Q9NZ09 502 aa11.6□□□□□ -0.55
PDE6C-201ENST00000371447 GLYATL1P3A0A0U1RQE8 302 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms