RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 PCDHGB5Q9Y5G0 923 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 TNPO3Q9Y5L0 923 aaKnown RBP28.58■■■□□ 2.17
SSBP3-204ENST00000371320 C1orf232A0A0U1RR37 186 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 ARL1P40616 181 aaPredicted RBP28.58■■■□□ 2.17
SSBP3-204ENST00000371320 ERVPABLB-1P60509 514 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 NFYCQ13952 458 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 CNKSR3Q6P9H4 555 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 ITIH5Q86UX2 942 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 CCDC97Q96F63 343 aaPredicted RBP28.58■■■□□ 2.17
SSBP3-204ENST00000371320 IL21Q9HBE4 155 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.57■■■□□ 2.16
SSBP3-204ENST00000371320 BAIAP3O94812 1187 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 OLFM2O95897 454 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 S100BP04271 92 aaPredicted RBP28.57■■■□□ 2.16
SSBP3-204ENST00000371320 UFM1P61960 85 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 TMCO2Q7Z6W1 182 aaPredicted RBP28.57■■■□□ 2.16
SSBP3-204ENST00000371320 TRIM54Q9BYV2 358 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 ASB8Q9H765 288 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 MRPL17Q9NRX2 175 aaKnown RBP28.57■■■□□ 2.16
SSBP3-204ENST00000371320 ARMC1Q9NVT9 282 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 EGFL7Q9UHF1 273 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 LSM7Q9UK45 103 aaKnown RBP28.57■■■□□ 2.16
SSBP3-204ENST00000371320 TRIM17Q9Y577 477 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 AQP12BA6NM10 295 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 TIPRLO75663 272 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 GK3PQ14409 553 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 PCBP2Q15366 365 aaKnown RBP eCLIP28.57■■■□□ 2.164e-9■■■■■ 71.4
SSBP3-204ENST00000371320 PDCD4Q53EL6 469 aaKnown RBP28.57■■■□□ 2.16
SSBP3-204ENST00000371320 HMBOX1Q6NT76 420 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 LETMD1Q6P1Q0 360 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 SBSNQ6UWP8 590 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 AQP12AQ8IXF9 295 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 FAM217AQ8IXS0 508 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 RBFAQ8N0V3 343 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 FNDC5Q8NAU1 212 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 GRIN3AQ8TCU5 1115 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 BOCQ9BWV1 1114 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 SPATA16Q9BXB7 569 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 PAK6Q9NQU5 681 aaPredicted RBP28.57■■■□□ 2.16
SSBP3-204ENST00000371320 PCDHA9Q9Y5H5 950 aa28.57■■■□□ 2.16
SSBP3-204ENST00000371320 GAPDHSO14556 408 aaPredicted RBP28.56■■■□□ 2.16
SSBP3-204ENST00000371320 SYNCRIPO60506 623 aaKnown RBP28.56■■■□□ 2.16
SSBP3-204ENST00000371320 TRBC1P01850 177 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 SMIM18P0DKX4 95 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 ITGB6P18564 788 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 RPS3P23396 243 aaKnown RBP eCLIP28.56■■■□□ 2.16
SSBP3-204ENST00000371320 YBX1P67809 324 aaKnown RBP28.56■■■□□ 2.16
SSBP3-204ENST00000371320 TLE2Q04725 743 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 C18orf21Q32NC0 220 aaPredicted RBP28.56■■■□□ 2.16
SSBP3-204ENST00000371320 ATP6AP1LQ52LC2 224 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 C6orf136Q5SQH8 315 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 SNX20Q7Z614 316 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 SPPL2CQ8IUH8 684 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 AHI1Q8N157 1196 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 METTL6Q8TCB7 284 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 NAT14Q8WUY8 206 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 ZNF597Q96LX8 424 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 PAPOLBQ9NRJ5 636 aaKnown RBP28.56■■■□□ 2.16
SSBP3-204ENST00000371320 GNPTGQ9UJJ9 305 aa28.56■■■□□ 2.16
SSBP3-204ENST00000371320 CCDC154A6NI56 674 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 AKAP10O43572 662 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 TNFAIP8O95379 198 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 SPATA31D3P0C874 917 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 GKP32189 559 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 ZFP36L2P47974 494 aaKnown RBP28.55■■■□□ 2.16
SSBP3-204ENST00000371320 APLP1P51693 650 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 POLR2JP52435 117 aaKnown RBP28.55■■■□□ 2.16
SSBP3-204ENST00000371320 POLE2P56282 527 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 NFATC2Q13469 925 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 SPATS1Q496A3 300 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 SLC39A5Q6ZMH5 540 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 SPATA31D4Q6ZUB0 917 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 GOLGA7Q7Z5G4 137 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 ACDQ96AP0 544 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 CCM2LQ9NUG4 571 aaPredicted RBP28.55■■■□□ 2.16
SSBP3-204ENST00000371320 PLK2Q9NYY3 685 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 SPG21Q9NZD8 308 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 ZIM2Q9NZV7 527 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 SUN2Q9UH99 717 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 APPL1Q9UKG1 709 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 C7orf72A4D263 438 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 ASPDHA6ND91 283 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 HTRA2O43464 458 aaPredicted RBP28.55■■■□□ 2.16
SSBP3-204ENST00000371320 EEDO75530 441 aaKnown RBP28.55■■■□□ 2.16
SSBP3-204ENST00000371320 FAM58BPP0C7Q3 252 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 PABPC4LP0CB38 370 aaKnown RBP28.55■■■□□ 2.16
SSBP3-204ENST00000371320 ITGALP20701 1170 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 CA5AP35218 305 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 INPP5AQ14642 412 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 ISLR2Q6UXK2 745 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 DNAJB14Q8TBM8 379 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 CIB1Q99828 191 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 IL26Q9NPH9 171 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 ACTR3BQ9P1U1 418 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 LEF1Q9UJU2 399 aaPredicted RBP28.55■■■□□ 2.16
SSBP3-204ENST00000371320 LZTS1Q9Y250 596 aa28.55■■■□□ 2.16
SSBP3-204ENST00000371320 RAD51BO15315 384 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 FFAR2O15552 330 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 CLDN7O95471 211 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 CAPN1P07384 714 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms