RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KNL1Q8NG31 2342 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 GPR179Q6PRD1 2367 aa13.71□□□□□ -0.22
TPM3-211ENST00000368531 IGLV3-16A0A075B6K0 115 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 CHUKO15111 745 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 KMOO15229 486 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 AQP9O43315 295 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 POP7O75817 140 aaKnown RBP13.7□□□□□ -0.22
TPM3-211ENST00000368531 ITGB6P18564 788 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 OGNP20774 298 aaKnown RBP13.7□□□□□ -0.22
TPM3-211ENST00000368531 NSG1P42857 185 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 SLC1A2P43004 574 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 EIF3BP55884 814 aaKnown RBP13.7□□□□□ -0.22
TPM3-211ENST00000368531 GPX6P59796 221 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 CTBSQ01459 385 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 MGAT5Q09328 741 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 ITIH4Q14624 930 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 DEFB133Q30KQ1 61 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 ZNF789Q5FWF6 425 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 UBAP2Q5T6F2 1119 aaKnown RBP13.7□□□□□ -0.22
TPM3-211ENST00000368531 STPG1Q5TH74 334 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 SLC30A9Q6PML9 568 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 CILP2Q8IUL8 1156 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 ZNF547Q8IVP9 402 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 SLC25A45Q8N413 288 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 GPR150Q8NGU9 434 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 FAM167BQ9BTA0 163 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 TSPYL1Q9H0U9 437 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 CDC42EP4Q9H3Q1 356 aaKnown RBP13.7□□□□□ -0.22
TPM3-211ENST00000368531 OSGEPL1Q9H4B0 414 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 LRRC4CQ9HCJ2 640 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 DNAAF2Q9NVR5 837 aaKnown RBP13.7□□□□□ -0.22
TPM3-211ENST00000368531 NINJ2Q9NZG7 142 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 SLC23A2Q9UGH3 650 aa13.7□□□□□ -0.22
TPM3-211ENST00000368531 USP34Q70CQ2 3546 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 IQCF5A8MTL0 148 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 GPR89AB7ZAQ6 455 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 PFDN6O15212 129 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 YKT6O15498 198 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 SGTAO43765 313 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 FOXD2O60548 495 aaPredicted RBP13.69□□□□□ -0.22
TPM3-211ENST00000368531 SNX2O60749 519 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 ACSL3O95573 720 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 S1PR4O95977 384 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 ANXA6P08133 673 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 GPR89BP0CG08 455 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 ZNF7P17097 686 aaPredicted RBP13.69□□□□□ -0.22
TPM3-211ENST00000368531 FMO4P31512 558 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 ACTR1BP42025 376 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 ACTR1AP61163 376 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 VSNL1P62760 191 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 ILF3Q12906 894 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPM3-211ENST00000368531 ELOCQ15369 112 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 TYSND1Q2T9J0 566 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 TEDDM1Q5T9Z0 273 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 PTRHD1Q6GMV3 140 aaKnown RBP13.69□□□□□ -0.22
TPM3-211ENST00000368531 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
TPM3-211ENST00000368531 KRT222Q8N1A0 295 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 EID2Q8N6I1 236 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 FAM46DQ8NEK8 389 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 GABPB2Q8TAK5 448 aaPredicted RBP13.69□□□□□ -0.22
TPM3-211ENST00000368531 UHMK1Q8TAS1 419 aaKnown RBP13.69□□□□□ -0.22
TPM3-211ENST00000368531 SAP25Q8TEE9 199 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 FBF1Q8TES7 1133 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 SETD7Q8WTS6 366 aaKnown RBP13.69□□□□□ -0.22
TPM3-211ENST00000368531 GSDMCQ9BYG8 508 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 KLC4Q9NSK0 619 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 TRNAU1APQ9NX07 287 aaKnown RBP13.69□□□□□ -0.22
TPM3-211ENST00000368531 MOCS1Q9NZB8 636 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 ST14Q9Y5Y6 855 aa13.69□□□□□ -0.22
TPM3-211ENST00000368531 OTOGLQ3ZCN5 2332 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 TCRBV9S1A1TA0A576 114 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 NEMP2A6NFY4 417 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 CXorf49A8MYA2 514 aaPredicted RBP13.68□□□□□ -0.22
TPM3-211ENST00000368531 PRMT5O14744 637 aaPredicted RBP13.68□□□□□ -0.22
TPM3-211ENST00000368531 YY2O15391 372 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 HAUS5O94927 633 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 TRIM16O95361 564 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 GSTA2P09210 222 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 OR56A5P0C7T3 313 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 PLA2G5P39877 138 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 ABCG1P45844 678 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 SLMAPQ14BN4 828 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 SUZ12Q15022 739 aaKnown RBP13.68□□□□□ -0.22
TPM3-211ENST00000368531 BRD3Q15059 726 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 RNF187Q5TA31 235 aaPredicted RBP13.68□□□□□ -0.22
TPM3-211ENST00000368531 CNSTQ6PJW8 725 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 PACS1Q6VY07 963 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 NAPRTQ6XQN6 538 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 KANSL1Q7Z3B3 1105 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 AMZ2Q86W34 360 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 GKN2Q86XP6 184 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 NRROSQ86YC3 692 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 CTAGE3PQ8IX95 158 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 FSTL5Q8N475 847 aaPredicted RBP13.68□□□□□ -0.22
TPM3-211ENST00000368531 C2CD4AQ8NCU7 369 aaPredicted RBP13.68□□□□□ -0.22
TPM3-211ENST00000368531 GPBAR1Q8TDU6 330 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 FAM136AQ96C01 138 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 MRRFQ96E11 262 aaKnown RBP13.68□□□□□ -0.22
TPM3-211ENST00000368531 ZNF514Q96K75 400 aaPredicted RBP13.68□□□□□ -0.22
TPM3-211ENST00000368531 TCF12Q99081 682 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms