RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 C8orf33Q9H7E9 229 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 POPDC2Q9HBU9 364 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 TNFRSF12AQ9NP84 129 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SLCO1B3Q9NPD5 702 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 KLHL11Q9NVR0 708 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 STK39Q9UEW8 545 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 NDOR1Q9UHB4 597 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 PCSK1NQ9UHG2 260 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SFMBT1Q9UHJ3 866 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 TAGLN3Q9UI15 199 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 CYTH4Q9UIA0 394 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 STAP1Q9ULZ2 295 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 CHMP2BQ9UQN3 213 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 LRCH1Q9Y2L9 728 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 TTLL3Q9Y4R7 772 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 DCHS2Q6V1P9 2916 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 FBN1P35555 2871 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 A0A0G2JND7 137 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 ZNF503-AS2A6NEH8 195 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 TRIM49D1C9J1S8 452 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 FAM47E-STBD1D6RA91 191 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 E5RJQ4 531 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 SLCO1B7G3V0H7 640 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 GOLGA8MH3BSY2 632 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 HRKO00198 91 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 XPO1O14980 1071 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 TSPAN1O60635 241 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 RFPL3O75679 317 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 FBXO21O94952 628 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 F9P00740 461 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 C1QAP02745 245 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 PGAM1P18669 254 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 ACAT1P24752 427 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 CYP2F1P24903 491 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 TACR1P25103 407 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 HTR7P34969 479 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 MATKP42679 507 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 KPNA1P52294 538 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 AP2B1P63010 937 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 TMPRSS15P98073 1019 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 SLC34A1Q06495 639 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 KLC1Q07866 573 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 ASPHQ12797 758 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 STX3Q13277 289 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 HNRNPDQ14103 355 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 KIR3DS1Q14943 382 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 NAA25Q14CX7 972 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 GOLGA7BQ2TAP0 167 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 SLC25A52Q3SY17 297 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 XKR4Q5GH76 650 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 FSCBQ5H9T9 825 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 SPANXN3Q5MJ09 141 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 UBXN11Q5T124 520 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 SDE2Q6IQ49 451 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 FUT10Q6P4F1 479 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 NOTUMQ6P988 496 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 SCARA5Q6ZMJ2 495 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 CYP4V2Q6ZWL3 525 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 LIMS2Q7Z4I7 341 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 CAND1Q86VP6 1230 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 RASSF3Q86WH2 238 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 TMEM126BQ8IUX1 230 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 CCDC117Q8IWD4 279 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 CTAGE3PQ8IX95 158 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 Q8N1Y9 231 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 ARHGAP18Q8N392 663 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 KIF2BQ8N4N8 673 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 HDDC3Q8N4P3 179 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 LRRC71Q8N4P6 559 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 PQLC3Q8N755 202 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 EMC1Q8N766 993 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 PPM1NQ8N819 430 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 GPATCH11Q8N954 259 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 GSTCDQ8NEC7 633 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 PCDH19Q8TAB3 1148 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 GABPB2Q8TAK5 448 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 RDH11Q8TC12 318 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 FAM172AQ8WUF8 416 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 DEPDC1BQ8WUY9 529 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 HTR3CQ8WXA8 447 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 RLN3Q8WXF3 142 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 DNAJC9Q8WXX5 260 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 JADE3Q92613 823 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 NT5C3BQ969T7 300 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 NTAN1Q96AB6 310 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 SPATA13Q96N96 652 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 FAM111AQ96PZ2 611 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 CPNE1Q99829 537 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 SNRNP25Q9BV90 132 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 TRIM6Q9C030 488 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 KIF9Q9HAQ2 790 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 KCNK13Q9HB14 408 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 MRM3Q9HC36 420 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 NDE1Q9NXR1 346 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 TRHDEQ9UKU6 1024 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 L3MBTL1Q9Y468 752 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 X6R8D5 127 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 SCN1AP35498 2009 aa6.49□□□□□ -1.37
ECHDC1-202ENST00000368289 MAP1AP78559 2803 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms