RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 DNMT3AQ9Y6K1 912 aaPredicted RBP23.54■■□□□ 1.36
PFDN2-201ENST00000368010 PMS2P1A4D2B8 440 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 OR2AG2A6NM03 316 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 AGAP14A8MT82 685 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 RRP8O43159 456 aaKnown RBP23.53■■□□□ 1.36
PFDN2-201ENST00000368010 POP7O75817 140 aaKnown RBP23.53■■□□□ 1.36
PFDN2-201ENST00000368010 SUN1O94901 812 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 TNFSF15O95150 251 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 MC4RP32245 332 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 PCBP4P57723 403 aaKnown RBP23.53■■□□□ 1.36
PFDN2-201ENST00000368010 SQSTM1Q13501 440 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 NKAIN2Q5VXU1 208 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 ABRAXAS1Q6UWZ7 409 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 GSTA5Q7RTV2 222 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 GLIS1Q8NBF1 620 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 STYXQ8WUJ0 223 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 TMEM159Q96B96 161 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 DCUN1D1Q96GG9 259 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 DPYSL5Q9BPU6 564 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 KCNF1Q9H3M0 494 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 SEMA6CQ9H3T2 930 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 NLE1Q9NVX2 485 aaPredicted RBP23.53■■□□□ 1.36
PFDN2-201ENST00000368010 LOXL2Q9Y4K0 774 aa23.53■■□□□ 1.36
PFDN2-201ENST00000368010 ANKRD11Q6UB99 2663 aaPredicted RBP23.53■■□□□ 1.36
PFDN2-201ENST00000368010 H7C0S8 307 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 CCL22O00626 93 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 DUX1O43812 170 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 ITGA2BP08514 1039 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 ZSCAN5DPP0CG00 497 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 RALBP11234 206 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 RPL22P35268 128 aaKnown RBP23.52■■□□□ 1.36
PFDN2-201ENST00000368010 UBE2IP63279 158 aaKnown RBP23.52■■□□□ 1.36
PFDN2-201ENST00000368010 DMPKQ09013 629 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 GPR33Q49SQ1 333 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 FNBP1LQ5T0N5 605 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 AGAP9Q5VTM2 703 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 WASH2PQ6VEQ5 465 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 LRRC69Q6ZNQ3 347 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 DET1Q7L5Y6 550 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 TRIM48Q8IWZ4 208 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 REXO1L1PQ8IX06 675 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 NXPE1Q8N323 547 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 CMKLR1Q99788 373 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 WASH6PQ9NQA3 447 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 AKAP7Q9P0M2 348 aaPredicted RBP23.52■■□□□ 1.36
PFDN2-201ENST00000368010 SCHIP1Q9P0W5 487 aaPredicted RBP23.52■■□□□ 1.36
PFDN2-201ENST00000368010 PKD1L2Q7Z442 2459 aa23.52■■□□□ 1.36
PFDN2-201ENST00000368010 CFAP99D6REC4 459 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 VIPP01282 170 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 APRTP07741 180 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 JMJD7P0C870 316 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 XRCC1P18887 633 aaPredicted RBP23.51■■□□□ 1.35
PFDN2-201ENST00000368010 MSNP26038 577 aaKnown RBP23.51■■□□□ 1.35
PFDN2-201ENST00000368010 RPL10P27635 214 aaKnown RBP23.51■■□□□ 1.35
PFDN2-201ENST00000368010 CSF2RBP32927 897 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 HALP42357 657 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 EPHA4P54764 986 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 DRG2P55039 364 aaKnown RBP23.51■■□□□ 1.35
PFDN2-201ENST00000368010 C4orf22Q6V702 233 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 ZNF248Q8NDW4 579 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 OR4D9Q8NGE8 314 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 HEXDCQ8WVB3 486 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 HNRNPLLQ8WVV9 542 aaKnown RBP23.51■■□□□ 1.35
PFDN2-201ENST00000368010 SGF29Q96ES7 293 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 PBKQ96KB5 322 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 COPS8Q99627 209 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 FAM96AQ9H5X1 160 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 POT1Q9NUX5 634 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 DMXL2Q8TDJ6 3036 aa23.51■■□□□ 1.35
PFDN2-201ENST00000368010 UNC13CQ8NB66 2214 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 IGHV5-10-1A0A0J9YXX1 117 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 HGFP14210 728 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 HOXB3P14651 431 aaPredicted RBP23.5■■□□□ 1.35
PFDN2-201ENST00000368010 BRAFP15056 766 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 KCNJ1P48048 391 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 LIMK2P53671 638 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 SKIDA1Q1XH10 827 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 ZRANB3Q5FWF4 1079 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 C19orf48Q6RUI8 117 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 ZNF574Q6ZN55 896 aaPredicted RBP23.5■■□□□ 1.35
PFDN2-201ENST00000368010 PRELID2Q8N945 189 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 CDKN2AIPNLQ96HQ2 116 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 CCDC74BQ96LY2 380 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 EPB41L1Q9H4G0 881 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 ZNF624Q9P2J8 865 aaPredicted RBP23.5■■□□□ 1.35
PFDN2-201ENST00000368010 PISDQ9UG56 409 aa23.5■■□□□ 1.35
PFDN2-201ENST00000368010 URB1O60287 2271 aaKnown RBP23.49■■□□□ 1.35
PFDN2-201ENST00000368010 HEATR9A2RTY3 570 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 KLHL33A6NCF5 533 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 MROH6A6NGR9 719 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 LILRA5A6NI73 299 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 CDRT15L2A8MXV6 281 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 AGRPO00253 132 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 KIF5CO60282 957 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 PBLDP30039 288 aaPredicted RBP23.49■■□□□ 1.35
PFDN2-201ENST00000368010 SLC19A1P41440 591 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 GRIA1P42261 906 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 ABCG1P45844 678 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 MAPK9P45984 424 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 TRA2AQ13595 282 aaKnown RBP eCLIP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms