RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ARMC12Q5T9G4 340 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 SYTL1Q8IYJ3 562 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 OR8K5Q8NH50 307 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 PPP4R1Q8TF05 950 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 CPT1BQ92523 772 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 HDAC11Q96DB2 347 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 C11orf70Q9BRQ4 267 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 PCMTD2Q9NV79 361 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 ATXN10Q9UBB4 475 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 SLC23A2Q9UGH3 650 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 MAN1B1Q9UKM7 699 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 NCOA6Q14686 2063 aaPredicted RBP14.34□□□□□ -0.11
VAMP4-202ENST00000367740 TLCD2A6NGC4 264 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 PDZK1P1A8MUH7 402 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 KLHL41O60662 606 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 ARL4DP49703 201 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 AIF1P55008 147 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 KCNK10P57789 538 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 HSD11B2P80365 405 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 SMTNL2Q2TAL5 461 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 HENMT1Q5T8I9 393 aaKnown RBP14.33□□□□□ -0.12
VAMP4-202ENST00000367740 DPY19L2P1Q6NXN4 242 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 RBM12BQ8IXT5 1001 aaKnown RBP14.33□□□□□ -0.12
VAMP4-202ENST00000367740 EPS8L1Q8TE68 723 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 FER1L6-AS2Q96M78 137 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 MGME1Q9BQP7 344 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 TMUB1Q9BVT8 246 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 FAM207AQ9NSI2 230 aaPredicted RBP14.33□□□□□ -0.12
VAMP4-202ENST00000367740 GPATCH2LQ9NWQ4 482 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 SEC16AO15027 2179 aa14.33□□□□□ -0.12
VAMP4-202ENST00000367740 ACANP16112 2415 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 A0A0J9YYE9 177 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 C19orf84I3L1E1 186 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 FZD6O60353 706 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 JRKO75564 520 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 MTA2O94776 668 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 PEX11BO96011 259 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 TRBC1P01850 177 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 KRT3P12035 628 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 RPL10P27635 214 aaKnown RBP14.32□□□□□ -0.12
VAMP4-202ENST00000367740 HSPA9P38646 679 aaKnown RBP14.32□□□□□ -0.12
VAMP4-202ENST00000367740 SOX8P57073 446 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 MAXP61244 160 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 OTUD4Q01804 1114 aaKnown RBP14.32□□□□□ -0.12
VAMP4-202ENST00000367740 CDC16Q13042 620 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 INSCQ1MX18 579 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 PTCHD3Q3KNS1 767 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 ZNF648Q5T619 568 aaPredicted RBP14.32□□□□□ -0.12
VAMP4-202ENST00000367740 WDR59Q6PJI9 974 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 CRTC3Q6UUV7 619 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 TRIM72Q6ZMU5 477 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 SLC30A5Q8TAD4 765 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 CLIP3Q96DZ5 547 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 C14orf79Q96F83 325 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 ZNF599Q96NL3 588 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 IP6K3Q96PC2 410 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 ARFGAP3Q9NP61 516 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 SUCOQ9UBS9 1254 aaKnown RBP14.32□□□□□ -0.12
VAMP4-202ENST00000367740 DNAJC16Q9Y2G8 782 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 CNTRLQ7Z7A1 2325 aa14.32□□□□□ -0.12
VAMP4-202ENST00000367740 VPS13CQ709C8 3753 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 EEF2KO00418 725 aaKnown RBP14.31□□□□□ -0.12
VAMP4-202ENST00000367740 KLF7O75840 302 aaPredicted RBP14.31□□□□□ -0.12
VAMP4-202ENST00000367740 FAM155BO75949 473 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 CYP1A1P04798 512 aaPredicted RBP14.31□□□□□ -0.12
VAMP4-202ENST00000367740 TDGF1P3P51864 188 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 DRG2P55039 364 aaKnown RBP14.31□□□□□ -0.12
VAMP4-202ENST00000367740 GSCP56915 257 aaPredicted RBP14.31□□□□□ -0.12
VAMP4-202ENST00000367740 PTP4A2Q12974 167 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 ZNF169Q14929 603 aaPredicted RBP14.31□□□□□ -0.12
VAMP4-202ENST00000367740 TDRD12Q587J7 1177 aaKnown RBP14.31□□□□□ -0.12
VAMP4-202ENST00000367740 DNTTIP2Q5QJE6 756 aaKnown RBP14.31□□□□□ -0.12
VAMP4-202ENST00000367740 ERICH6BQ5W0A0 696 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 FAM180AQ6UWF9 173 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 TTC30BQ8N4P2 665 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 GPR150Q8NGU9 434 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 SLC20A1Q8WUM9 679 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 CXorf40BQ96DE9 158 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 AGAP3Q96P47 875 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 CD180Q99467 661 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 OR2AG1Q9H205 316 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 OLAHQ9NV23 265 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 FHOD1Q9Y613 1164 aa14.31□□□□□ -0.12
VAMP4-202ENST00000367740 CHUKO15111 745 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 LCA5LO95447 670 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 CLDN7O95471 211 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 CD99P14209 185 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 DRD2P14416 443 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 ERCC2P18074 760 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 FECHP22830 423 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 CA9Q16790 459 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 ZNF789Q5FWF6 425 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 B3GNTL1Q67FW5 361 aaPredicted RBP14.3□□□□□ -0.12
VAMP4-202ENST00000367740 IGFL2Q6UWQ7 119 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 RPTNQ6XPR3 784 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 COG1Q8WTW3 980 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 NANOS1Q8WY41 292 aaKnown RBP14.3□□□□□ -0.12
VAMP4-202ENST00000367740 RTN4Q9NQC3 1192 aaKnown RBP14.3□□□□□ -0.12
VAMP4-202ENST00000367740 P4HTMQ9NXG6 502 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms