RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 LAMB3Q13751 1172 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 PIGHQ14442 188 aaPredicted RBP9.65□□□□□ -0.86
NUP43-203ENST00000367404 ASIC2Q16515 512 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 OXLD1Q5BKU9 147 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 NCBP2-AS2Q69YL0 99 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 HIST2H2BCQ6DN03 193 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 TIGD7Q6NT04 549 aaPredicted RBP9.65□□□□□ -0.86
NUP43-203ENST00000367404 LPCAT1Q8NF37 534 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 CT55Q8WUE5 264 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 RSC1A1Q92681 617 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 EID2BQ96D98 161 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 TGM7Q96PF1 710 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 TSGA13Q96PP4 275 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 TIMM29Q9BSF4 260 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 RAB33BQ9H082 229 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 ISCUQ9H1K1 167 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 ETNK1Q9HBU6 452 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 MLXIPLQ9NP71 852 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 LHX9Q9NQ69 397 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 KLC4Q9NSK0 619 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 POT1Q9NUX5 634 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 AIPL1Q9NZN9 384 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 CHMP5Q9NZZ3 219 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 ZNF624Q9P2J8 865 aaPredicted RBP9.65□□□□□ -0.86
NUP43-203ENST00000367404 EPHA6Q9UF33 1036 aa9.65□□□□□ -0.86
NUP43-203ENST00000367404 KIF1CO43896 1103 aaKnown RBP9.64□□□□□ -0.87
NUP43-203ENST00000367404 VPS4BO75351 444 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 KATNA1O75449 491 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 MTA2O94776 668 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 TIAF1O95411 115 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 VIPP01282 170 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 MMP2P08253 660 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 CD48P09326 243 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 BRAFP15056 766 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 TYRP1P17643 537 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 NELFEP18615 380 aaKnown RBP9.64□□□□□ -0.87
NUP43-203ENST00000367404 GNLYP22749 145 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 CCNCP24863 283 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 SEPHS1P49903 392 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 ITKQ08881 620 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 ANKRD20A8PQ5CZ79 823 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 ZNF569Q5MCW4 686 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 FHL5Q5TD97 284 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 AGAP9Q5VTM2 703 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 PAPD7Q5XG87 772 aaKnown RBP9.64□□□□□ -0.87
NUP43-203ENST00000367404 PDPK2PQ6A1A2 396 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 CYB5D1Q6P9G0 228 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 ABRAXAS1Q6UWZ7 409 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 WASH2PQ6VEQ5 465 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 ADGRG6Q86SQ4 1221 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 PPP1R3BQ86XI6 285 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 RASGRP3Q8IV61 690 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 RBM12BQ8IXT5 1001 aaKnown RBP9.64□□□□□ -0.87
NUP43-203ENST00000367404 SSC4DQ8WTU2 575 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 SEC14L1Q92503 715 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 RNF31Q96EP0 1072 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 SLC41A2Q96JW4 573 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 FCRL4Q96PJ5 515 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 ZSCAN5AQ9BUG6 496 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 TRIM55Q9BYV6 548 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 TWSG1Q9GZX9 223 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 OR2AG1Q9H205 316 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 OSGEPL1Q9H4B0 414 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 TRIM39Q9HCM9 518 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 SLC40A1Q9NP59 571 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 WASH6PQ9NQA3 447 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 HAUS2Q9NVX0 235 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 ANO10Q9NW15 660 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 RBM22Q9NW64 420 aaKnown RBP eCLIP9.64□□□□□ -0.87
NUP43-203ENST00000367404 MYO1AQ9UBC5 1043 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 SLC23A2Q9UGH3 650 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 LNPEPQ9UIQ6 1025 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 VPS4AQ9UN37 437 aa9.64□□□□□ -0.87
NUP43-203ENST00000367404 PCDHGA9Q9Y5G4 932 aaKnown RBP9.64□□□□□ -0.87
NUP43-203ENST00000367404 ANKRD66B4E2M5 251 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 KMOO15229 486 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 DNAJB5O75953 348 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 AGFG2O95081 481 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 RNF224P0DH78 156 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 AMD1P17707 334 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 CASP14P31944 242 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 DPYSL3Q14195 570 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 GPR18Q14330 331 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 KRT81Q14533 505 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 STX1AQ16623 288 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 IFI16Q16666 785 aaKnown RBP9.63□□□□□ -0.87
NUP43-203ENST00000367404 UGT8Q16880 541 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 CCDC183Q5T5S1 534 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 ZNF648Q5T619 568 aaPredicted RBP9.63□□□□□ -0.87
NUP43-203ENST00000367404 CRTC3Q6UUV7 619 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 CLEC17AQ6ZS10 378 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 C11orf96Q7Z7L8 435 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 ZNF547Q8IVP9 402 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 TRIM48Q8IWZ4 208 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 TRAM1L1Q8N609 369 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 CPT1CQ8TCG5 803 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 CCHCR1Q8TD31 782 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 THAP4Q8WY91 577 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 GLYATL1Q969I3 302 aa9.63□□□□□ -0.87
NUP43-203ENST00000367404 FAF2Q96CS3 445 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms