RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 BSPRYQ5W0U4 402 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 MSANTD2Q6P1R3 559 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 TSSK4Q6SA08 328 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 LAYNQ6UX15 382 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 DGLUCYQ7Z3D6 616 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 TMEM110Q86TL2 294 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 LONP2Q86WA8 852 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 TMEM25Q86YD3 366 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 TXLNBQ8N3L3 684 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 SPC24Q8NBT2 197 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 OR8K1Q8NGG5 319 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 SLC30A5Q8TAD4 765 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 PIWIL1Q96J94 861 aaKnown RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 PPP1R9BQ96SB3 815 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 CHP1Q99653 195 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 CRB3Q9BUF7 120 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 DCLK3Q9C098 648 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 WDR12Q9GZL7 423 aaKnown RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 ZNF703Q9H7S9 590 aaPredicted RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 ABCC13Q9NSE7 274 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 TAS2R14Q9NYV8 317 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 WDR35Q9P2L0 1181 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 LRCH1Q9Y2L9 728 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 HBS1LQ9Y450 684 aaKnown RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 NOX1Q9Y5S8 564 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 CACNA1BQ00975 2339 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 CNOT1A5YKK6 2376 aaKnown RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 PLXND1Q9Y4D7 1925 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 RALGAPA1Q6GYQ0 2036 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 CHD8Q9HCK8 2581 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 CLCA1A8K7I4 914 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 E5RJQ4 531 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 MDM4O15151 490 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 TULP3O75386 442 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 KAT7O95251 611 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 LSM8O95777 96 aaKnown RBP7.95□□□□□ -1.14
YBX3-204ENST00000366290 LATS1O95835 1130 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 PENKP01210 267 aaPredicted RBP7.95□□□□□ -1.14
YBX3-204ENST00000366290 IGLV3-27P01718 113 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 ERBB2P04626 1255 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 SERPING1P05155 500 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 ZNF20P17024 532 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 ITGALP20701 1170 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 IL1R2P27930 398 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 CHKAP35790 457 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 ACADSBP45954 432 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 HSPA7P48741 367 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 ATXN1P54253 815 aaKnown RBP7.95□□□□□ -1.14
YBX3-204ENST00000366290 SLC25A3Q00325 362 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 DYRK1AQ13627 763 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 CYP2A13Q16696 494 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 GEN1Q17RS7 908 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 MPEG1Q2M385 716 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 BEAN1Q3B7T3 259 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 SPDYE7PQ495Y7 208 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 CD300EQ496F6 205 aaPredicted RBP7.95□□□□□ -1.14
YBX3-204ENST00000366290 C2CD6Q53TS8 623 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 NAA35Q5VZE5 725 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 TRIM72Q6ZMU5 477 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 DNAAF5Q86Y56 855 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 MYLK4Q86YV6 388 aaPredicted RBP7.95□□□□□ -1.14
YBX3-204ENST00000366290 TMEM139Q8IV31 216 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 CNGA4Q8IV77 575 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 ABCA7Q8IZY2 2146 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 SIX6OS1Q8N1H7 587 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 CPXM2Q8N436 756 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 TMEM35BQ8NCS4 154 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 ZNF397Q8NF99 534 aaPredicted RBP7.95□□□□□ -1.14
YBX3-204ENST00000366290 CLEC4CQ8WTT0 213 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 TMEM125Q96AQ2 219 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 NACC2Q96BF6 587 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 P2RY11Q96G91 374 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 BOD1Q96IK1 185 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 PPP1R13BQ96KQ4 1090 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 C1QTNF3Q9BXJ4 246 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 ALOXE3Q9BYJ1 711 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 TBC1D23Q9NUY8 699 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 LSM7Q9UK45 103 aaKnown RBP7.95□□□□□ -1.14
YBX3-204ENST00000366290 CEP83Q9Y592 693 aa7.95□□□□□ -1.14
YBX3-204ENST00000366290 CFAP47Q6ZTR5 3102 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 A0A087X0T9 212 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 LOC102723971A0A1B0GUV8 181 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 TCRBV5S1A1TA0A578 114 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 NDUFA10O95299 355 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 APODP05090 189 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 FYNP06241 537 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 CISD3P0C7P0 127 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 CCDC172P0C7W6 258 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 FAM228BP0C875 321 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 IRF1P10914 325 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 TNFAIP3P21580 790 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 NR4A1P22736 598 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 MMP8P22894 467 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 ZFP36P26651 326 aaKnown RBP7.94□□□□□ -1.14
YBX3-204ENST00000366290 ACVR2AP27037 513 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 CORO1AP31146 461 aaKnown RBP7.94□□□□□ -1.14
YBX3-204ENST00000366290 GABRB2P47870 512 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 PXNP49023 591 aaPredicted RBP7.94□□□□□ -1.14
YBX3-204ENST00000366290 RPS7P62081 194 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms