RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SLC30A1Q9Y6M5 507 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TENM4Q6N022 2769 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 GLYATL1P3A0A0U1RQE8 302 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 EFCAB7A8K855 629 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 AGAP14A8MT82 685 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 STMND1H3BQB6 276 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 H7C0C1 242 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 BUD23O43709 281 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 KCNJ13O60928 360 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ANXA9O76027 345 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ANKRD34CP0C6C1 535 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 RBP3P10745 1247 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ATP5OP48047 213 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 GEMP55040 296 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PTPRCAPQ14761 206 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CLCA4Q14CN2 919 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PLA2G4EQ3MJ16 856 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 DENND5AQ6IQ26 1287 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 XKR5Q6UX68 686 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TMEM26Q6ZUK4 368 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 RASGEF1AQ8N9B8 481 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SGF29Q96ES7 293 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ASPSCR1Q9BZE9 553 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 OSGEPL1Q9H4B0 414 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SLC39A1Q9NY26 324 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PILRAQ9UKJ1 303 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 DNAJC16Q9Y2G8 782 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 WDR37Q9Y2I8 494 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 DNMT3AQ9Y6K1 912 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-202ENST00000366159 A0A0U1RQJ8 604 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 IDSP22304 550 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 RPL10P27635 214 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CTSCP53634 463 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 RAB15P59190 212 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 EIF3EP60228 445 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 OLIG2Q13516 323 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 LY6DQ14210 128 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TAF1AQ15573 450 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TAF1BQ53T94 588 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 MANEAQ5SRI9 462 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 LDLRAP1Q5SW96 308 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 GPRC6AQ5T6X5 926 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ANKS6Q68DC2 871 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ITPRIPL1Q6GPH6 555 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 FAM151BQ6UXP7 276 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 VASH2Q86V25 355 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CDKL3Q8IVW4 592 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CCDC112Q8NEF3 446 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 RTP4Q96DX8 246 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TEFMQ96QE5 360 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 BAG1Q99933 345 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 FAM118BQ9BPY3 351 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 C19orf43Q9BQ61 176 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 FICDQ9BVA6 458 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 FSD1LQ9BXM9 530 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ARNT2Q9HBZ2 717 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 POT1Q9NUX5 634 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SIDT1Q9NXL6 827 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 AAR2Q9Y312 384 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PKP3Q9Y446 797 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PCDHB11Q9Y5F2 797 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ARL5AQ9Y689 179 aa13.43□□□□□ -0.26
TNFRSF1A-202ENST00000366159 C5orf60A6NFR6 353 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 OR52A4PA6NMU1 304 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 A8MU76 341 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 DDX3YO15523 660 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SGTAO43765 313 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 POP7O75817 140 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TJP3O95049 919 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 IPO7O95373 1038 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 VIPP01282 170 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ITGB2P05107 769 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 LPOP22079 712 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PSMB4P28070 264 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 DRG2P55039 364 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 GFERP55789 205 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 XIAPP98170 497 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 KLF1Q13351 362 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ITGA9Q13797 1035 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SNAP47Q5SQN1 464 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 DCAF12Q5T6F0 453 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 KCTD11Q693B1 232 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PLXDC1Q8IUK5 500 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 RBM12BQ8IXT5 1001 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 EXD3Q8N9H8 876 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ZNF398Q8TD17 642 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 MED8Q96G25 268 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 C9orf72Q96LT7 481 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SPATA13Q96N96 652 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 RAB33BQ9H082 229 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 KCTD3Q9Y597 815 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 COL6A6A6NMZ7 2263 aa13.42□□□□□ -0.26
TNFRSF1A-202ENST00000366159 STX7O15400 261 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TOX3O15405 576 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 KCNN4O15554 427 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 UBXN7O94888 489 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TNNT3P45378 269 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 NAP1L1P55209 391 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 GTF2H3Q13889 308 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms