RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 C1orf52Q8N6N3 182 aaKnown RBP4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 TM9SF4Q92544 642 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 EVI5LQ96CN4 794 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 SCRN2Q96FV2 425 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 C17orf77Q96MU5 243 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 OR2A14Q96R47 310 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 SLX1AQ9BQ83 275 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 SRSF8Q9BRL6 282 aaKnown RBP4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 RAB6CQ9H0N0 254 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 UNC45AQ9H3U1 944 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 PLK3Q9H4B4 646 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 MAP2K7O14733 419 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 SMAD9O15198 467 aaKnown RBP4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 OGG1O15527 345 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 USO1O60763 962 aaKnown RBP4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 GCNT3O95395 438 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 NR3C1P04150 777 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 HIST1H2ABP04908 130 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 CD48P09326 243 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 SELLP14151 372 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 HIST1H2ADP20671 130 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 GPR143P51810 404 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 MLLT10P55197 1068 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 SETQ01105 290 aaPredicted RBP4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 TECRLQ5HYJ1 363 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 CCNYL2Q5T2Q4 361 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 ACSM2BQ68CK6 577 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 ARHGAP11AQ6P4F7 1023 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 CFAP77Q6ZQR2 320 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 HIST3H2AQ7L7L0 130 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 TRPT1Q86TN4 253 aaKnown RBP4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 LONP2Q86WA8 852 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 GCSAMQ8N6F7 178 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 ANKRD52Q8NB46 1076 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 CTCFLQ8NI51 663 aaPredicted RBP4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 USP6NLQ92738 828 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 ABHD8Q96I13 439 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 MPP4Q96JB8 637 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 PRMT6Q96LA8 375 aaPredicted RBP4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 LITAFQ99732 161 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 MUC13Q9H3R2 512 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 RAD21L1Q9H4I0 556 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 KAT14Q9H8E8 782 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 PELI2Q9HAT8 420 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 KRT84Q9NSB2 600 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 SLC38A7Q9NVC3 462 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 PAG1Q9NWQ8 432 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 DNAJB4Q9UDY4 337 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 DBNLQ9UJU6 430 aaKnown RBP4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 MTMR6Q9Y217 621 aa4.22□□□□□ -1.73
RNU4-28P-201ENST00000364739 TEX13DA0A0J9YY54 714 aaPredicted RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 A0A1W2PPI3 338 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 OR2M5A3KFT3 312 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 MYO1GB0I1T2 1018 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 ANKRD66B4E2M5 251 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 GPC4O75487 556 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 DAB1O75553 588 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 OR2C1O95371 312 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 TUBBP07437 444 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 CLTBP09497 229 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 LAMP2P13473 410 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 ZNF23P17027 643 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 PSMA4P25789 261 aaKnown RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 NR0B1P51843 470 aaKnown RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 CTSCP53634 463 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 TUBB4BP68371 445 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 TFAP4Q01664 338 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 IKQ13123 557 aaPredicted RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 KIR2DS3Q14952 304 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 MEP1AQ16819 746 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 ASTE1Q2TB18 679 aaPredicted RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 ZNF876PQ49A33 203 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 NDUFAF5Q5TEU4 345 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 RBMS3Q6XE24 437 aaKnown RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 C15orf39Q6ZRI6 1047 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 ZNF534Q76KX8 674 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 PTOV1Q86YD1 416 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 NGEFQ8N5V2 710 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 RDM1Q8NG50 284 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 FAM76AQ8TAV0 307 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 TAS1R2Q8TE23 839 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 PPP4R1Q8TF05 950 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 SEMA4DQ92854 862 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 SENP5Q96HI0 755 aaPredicted RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 FSD1Q9BTV5 496 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 SH2D4AQ9H788 454 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 SLC52A3Q9NQ40 469 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 SEPT11Q9NVA2 429 aaKnown RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 ZNF624Q9P2J8 865 aaPredicted RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 YIPF1Q9Y548 306 aa4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 TDRD9Q8NDG6 1382 aaKnown RBP4.21□□□□□ -1.74
RNU4-28P-201ENST00000364739 PLOD2O00469 737 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 SCAMP1O15126 338 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 DDX58O95786 925 aaKnown RBP4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 CAVIN2O95810 425 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 TSHBP01222 138 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 TMEM11P17152 192 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 PAX3P23760 479 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 CHMP24386 653 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 ALDH4A1P30038 563 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms