RNA–Protein interactions for RNA: ENST00000360683.6

CSNK1G3-202, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-202ENST00000360683 SAV1Q9H4B6 383 aaPredicted RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 PLEKHA2Q9HB19 425 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 TRPC7Q9HCX4 862 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 LZTFL1Q9NQ48 299 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 PXMP2Q9NR77 195 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 ETAA1Q9NY74 926 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 DKK4Q9UBT3 224 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 RSPH14Q9UHP6 348 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 NDRG4Q9ULP0 352 aaKnown RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 POFUT2Q9Y2G5 429 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 COL4A2P08572 1712 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 METP08581 1390 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 COL16A1Q07092 1604 aaPredicted RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 TUBAL3A6NHL2 446 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 FBLL1A6NHQ2 334 aaKnown RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 B4E171 279 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 E9PBE3 544 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 IFNL4K9M1U5 179 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 TEX28O15482 410 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 CA12O43570 354 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 EXTL3O43909 919 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 GPRIN2O60269 458 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 ADAM23O75077 832 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 CNTN5O94779 1100 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 NFATC1O95644 943 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 SERPINB2P05120 415 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 ATXN1LP0C7T5 689 aaKnown RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 B4GALT1P15291 398 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 CD19P15391 556 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 KCNA3P22001 575 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 MARCKSP29966 332 aaPredicted RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 TRIM23P36406 574 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 GNL1P36915 607 aaPredicted RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 PBX1P40424 430 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 CCR10P46092 362 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 NRIP1P48552 1158 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 NDUFV1P49821 464 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 PEX3P56589 373 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 RAB25P57735 213 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 FPGSQ05932 587 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 NPRL3Q12980 569 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 SQLEQ14534 574 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 DLG2Q15700 870 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 VAMP3Q15836 100 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 SMU1Q2TAY7 513 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 HSDL1Q3SXM5 330 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 ZNF484Q5JVG2 852 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 NT5DC1Q5TFE4 455 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 TMEM198Q66K66 360 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 SLC9A4Q6AI14 798 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 CORO6Q6QEF8 472 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 MEX3BQ6ZN04 569 aaKnown RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 TMEM26Q6ZUK4 368 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 STXBP4Q6ZWJ1 553 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 RAB11FIP2Q7L804 512 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 MTERF4Q7Z6M4 381 aaKnown RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 SGMS1Q86VZ5 419 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 FUNDC1Q8IVP5 155 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 FAM219AQ8IW50 185 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 BBS5Q8N3I7 341 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 METTL25Q8N6Q8 603 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 TDRD5Q8NAT2 981 aaKnown RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 LEMD2Q8NC56 503 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 OR6Y1Q8NGX8 325 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 FANK1Q8TC84 345 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 THAP4Q8WY91 577 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 HERVK_113Q902F9 699 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 CENPIQ92674 756 aaPredicted RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 ZNF653Q96CK0 615 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 MBD6Q96DN6 1003 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 KLHL15Q96M94 604 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 OSBPL9Q96SU4 736 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 SECISBP2Q96T21 854 aaKnown RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 MED10Q9BTT4 135 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 TEKT3Q9BXF9 490 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 TPSD1Q9BZJ3 242 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 YIPF3Q9GZM5 350 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 ENKD1Q9H0I2 346 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 C11orf49Q9H6J7 331 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 CNOT7Q9UIV1 285 aaKnown RBP2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 MTMR6Q9Y217 621 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 RCE1Q9Y256 329 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 ZBTB1Q9Y2K1 713 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 CLDN16Q9Y5I7 305 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 JCADQ9P266 1359 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 BRWD1Q9NSI6 2320 aa2.11□□□□□ -2.07
CSNK1G3-202ENST00000360683 SYNJ2BP-COX16A0A087WUM0 186 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 CCDC195A0A1B0GUA6 201 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 ISPDA4D126 451 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 A4D1N5 150 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 AQP7P3A6NL99 342 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 C12orf71A8MTZ7 269 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 KCNJ18B7U540 433 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 GOLGA8KD6RF30 607 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 NPIPB6E9PJ23 425 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 EIF3DO15371 548 aaKnown RBP eCLIP2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 EIF3HO15372 352 aaKnown RBP eCLIP2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 PJA2O43164 708 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 GPAA1O43292 621 aa2.1□□□□□ -2.07
CSNK1G3-202ENST00000360683 UGDHO60701 494 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms