RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ECT2LQ008S8 904 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 CCNIQ14094 377 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 GSTA3Q16772 222 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 ARL13AQ5H913 290 aaPredicted RBP13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 DHDDSQ86SQ9 333 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 HPS6Q86YV9 775 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 SLC22A9Q8IVM8 553 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 NR1H4Q96RI1 486 aaPredicted RBP13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 COG4Q9H9E3 785 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 FAM50BQ9Y247 325 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 TBC1D3BA6NDS4 549 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 E2F6O75461 281 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 PGLSO95336 258 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 PIGNO95427 931 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 HNRNPCP07910 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 AOC1P19801 751 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 TXNDC5Q8NBS9 432 aaKnown RBP13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 ANKRD49Q8WVL7 239 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 MOCOSQ96EN8 888 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 MTG2Q9H4K7 406 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 THEGQ9P2T0 379 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 PIAS3Q9Y6X2 628 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 A0A0C4DFX4 3053 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 COL4A2P08572 1712 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 LOC730098B7Z3J9 87 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 MATN2O00339 956 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 HDAC3O15379 428 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 SOCS5O75159 536 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 NDUFS3O75489 264 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 KAT7O95251 611 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 BMP1P13497 986 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 CD9P21926 228 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 CTHP32929 405 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 TTPAP49638 278 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 COPAP53621 1224 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 TIAL1Q01085 375 aaKnown RBP eCLIP13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 DMC1Q14565 340 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 PTPRNQ16849 979 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 AARS2Q5JTZ9 985 aaKnown RBP13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 DGKKQ5KSL6 1271 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 TMEM207Q6UWW9 146 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 NCCRP1Q6ZVX7 275 aaPredicted RBP13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 SLC15A3Q8IY34 581 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 DEFB107AQ8IZN7 70 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 PIH1D2Q8WWB5 315 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 LPGAT1Q92604 370 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 ERLEC1Q96DZ1 483 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 MYO19Q96H55 970 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 HIC2Q96JB3 615 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 PPP1R36Q96LQ0 422 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 CCDC68Q9H2F9 335 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 ELOVL2Q9NXB9 296 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 SLC25A13Q9UJS0 675 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 ERVW-1Q9UQF0 538 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 HS3ST2Q9Y278 367 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 WDR37Q9Y2I8 494 aa13.72□□□□□ -0.21
CSNK1E-201ENST00000359867 MUC3AQ02505 3323 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 MAGEB3O15480 346 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 HTRA2O43464 458 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 ZNF821O75541 412 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 IPO13O94829 963 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 IGSF6O95976 241 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 CHRNGP07510 517 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 VARSP26640 1264 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 GKP32189 559 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 GALK1P51570 392 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 BCL2L1Q07817 233 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 TRIP10Q15642 601 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 PUS10Q3MIT2 529 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 TRIM67Q6ZTA4 783 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 PDSS2Q86YH6 399 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 LSMEM2Q8N112 164 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 PNPLA1Q8N8W4 532 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 ISG20Q96AZ6 181 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 MRGPRX3Q96LB0 322 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 FAM192AQ9GZU8 254 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 POLR3BQ9NW08 1133 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 PKP3Q9Y446 797 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 ZNF711Q9Y462 761 aa13.71□□□□□ -0.21
CSNK1E-201ENST00000359867 A0A0J9YVX5 310 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 SLC4A1P02730 911 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 TFEBP19484 476 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 CD72P21854 359 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 MC4RP32245 332 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 HMGCLP35914 325 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 GRIA2P42262 883 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 ZP2Q05996 745 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 GALNT1Q10472 559 aaPredicted RBP13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 PDAP1Q13442 181 aaKnown RBP13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 SEL1L3Q68CR1 1132 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 FRMD7Q6ZUT3 714 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 Q6ZVU0 165 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 ISCA2Q86U28 154 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 TAS2R13Q9NYV9 303 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 IL17CQ9P0M4 197 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 FKBPLQ9UIM3 349 aa13.71□□□□□ -0.22
CSNK1E-201ENST00000359867 COMMD10Q9Y6G5 202 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms