RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 PCDHB1Q9Y5F3 818 aa12.24□□□□□ -0.45
NIF3L1-201ENST00000359683 NFS1Q9Y697 457 aa12.24□□□□□ -0.45
NIF3L1-201ENST00000359683 PI4KAP42356 2102 aa12.24□□□□□ -0.45
NIF3L1-201ENST00000359683 CACNA1EQ15878 2313 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 UBA6A0AVT1 1052 aaPredicted RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 POC1B-GALNT4F8VUJ3 575 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 FAM155BO75949 473 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 PKMP14618 531 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 FMO4P31512 558 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 MSH2P43246 934 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 EIF3BP55884 814 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 SRP54P61011 504 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 EIF2B5Q13144 721 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 GTF2H3Q13889 308 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 ALG11Q2TAA5 492 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 BCL7AQ4VC05 210 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 CTSL3PQ5NE16 218 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 KCTD16Q68DU8 428 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 LAIR1Q6GTX8 287 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 TMEM220Q6QAJ8 160 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 ADGRD1Q6QNK2 874 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 DGLUCYQ7Z3D6 616 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 ZNF547Q8IVP9 402 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 DCAKDQ8WVC6 231 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 OR1E3Q8WZA6 343 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 PAFAH2Q99487 392 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 RBBP8Q99708 897 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 TMEM109Q9BVC6 243 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 ERVMER34-1Q9H9K5 563 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 PPCSQ9HAB8 311 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 MRPL40Q9NQ50 206 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 TXNDC16Q9P2K2 825 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 SLC24A2Q9UI40 661 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 ZNF180Q9UJW8 692 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 PNMA8BQ9ULN7 279 aaPredicted RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 CORO1CQ9ULV4 474 aaPredicted RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 ANKRD6Q9Y2G4 727 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 PCYT1BQ9Y5K3 369 aaPredicted RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 COMMD10Q9Y6G5 202 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 DNMT3AQ9Y6K1 912 aaPredicted RBP12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 DGKBQ9Y6T7 804 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 RALGAPA1Q6GYQ0 2036 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 DMXL1Q9Y485 3027 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 PIKFYVEQ9Y2I7 2098 aa12.23□□□□□ -0.45
NIF3L1-201ENST00000359683 A0A1B0GVT2 93 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PRSS38A1L453 326 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 H3BMM5 538 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 QSOX1O00391 747 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 GRID2O43424 1007 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 INHBAP08476 426 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 SPRP35270 261 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 CTSKP43235 329 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PRLHRP49683 370 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 C21orf59P57076 290 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 BNC1Q01954 994 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 CASP8Q14790 479 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 RASA2Q15283 850 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PYCR3Q53H96 274 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 SLC23A3Q6PIS1 610 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 DET1Q7L5Y6 550 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PARGQ86W56 976 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 TDRPQ86YL5 185 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 OR2W6PQ8NHA6 318 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 NAT14Q8WUY8 206 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 TSACCQ96A04 125 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 MRRFQ96E11 262 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 LINC00615Q96LM1 132 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 AARSD1Q9BTE6 412 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 ROPN1BQ9BZX4 212 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 ROPN1Q9HAT0 212 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 CAPN10Q9HC96 672 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 KLQ9UEF7 1012 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 KLF15Q9UIH9 416 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 GNPTGQ9UJJ9 305 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 SUFUQ9UMX1 484 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PLAAQ9Y263 795 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 MED19A0JLT2 244 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 HMX2A2RU54 273 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 OR2AG2A6NM03 316 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 F8W8V4 182 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 TNFP01375 233 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 OR56A5P0C7T3 313 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 CD9P21926 228 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 ABCG1P45844 678 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 SERPINB9P50453 376 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 LIMK2P53671 638 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PPARDQ03181 441 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PUM1Q14671 1186 aaKnown RBP eCLIP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 KIF19Q2TAC6 998 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PLA2G2CQ5R387 149 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 RBM20Q5T481 1227 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PTRHD1Q6GMV3 140 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 C11orf96Q7Z7L8 435 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 LRRTM4Q86VH4 590 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 ANKRD7Q92527 254 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 PDXPQ96GD0 296 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 VPS39Q96JC1 886 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 GPR22Q99680 433 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 CCDC68Q9H2F9 335 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 ARRDC1-AS1Q9H2J1 176 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms