RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MFN2O95140 757 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PRSS56P0CW18 603 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 IL7RP16871 459 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 LBPP18428 481 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 POLR2IP36954 125 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 HCAR3P49019 387 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CSRP3P50461 194 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CLCN5P51795 746 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 LSM3P62310 102 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 HERVK_113P63132 956 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 MRPS15P82914 257 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 IL1RL1Q01638 556 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CYBRD1Q53TN4 286 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PAGE3Q5JUK9 113 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 INTS11Q5TA45 600 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CILP2Q8IUL8 1156 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ARMC8Q8IUR7 673 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 DEPDC4Q8N2C3 294 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 TOP6BLQ8N6T0 577 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 RAB2BQ8WUD1 216 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 S100ZQ8WXG8 99 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 FIG4Q92562 907 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 UHRF1Q96T88 793 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ERVK-6Q9BXR3 956 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZNF304Q9HCX3 659 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 TREX1Q9NSU2 369 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 INTS7Q9NVH2 962 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ACTR3BQ9P1U1 418 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 POLG2Q9UHN1 485 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 SARDHQ9UL12 918 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PSME4Q14997 1843 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PARP14Q460N5 1801 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CCDC154A6NI56 674 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 AQP12BA6NM10 295 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 J3KR12 359 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 FXYD1O00168 92 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 GNGT2O14610 69 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 MATN3O15232 486 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ACOX3O15254 700 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 RASAL1O95294 804 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 SMPD1P17405 629 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 WARSP23381 471 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 IL32P24001 234 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PRDX3P30048 256 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 AIF1P55008 147 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 UFM1P61960 85 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 IFITM3Q01628 133 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CLCQ05315 142 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 TNK2Q07912 1038 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 SNX17Q15036 470 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PYCR3Q53H96 274 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZCCHC8Q6NZY4 707 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 RANBP10Q6VN20 620 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 KIAA0408Q6ZU52 694 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ARHGAP12Q8IWW6 846 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 AQP12AQ8IXF9 295 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 MFSD2AQ8NA29 543 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 GALNT6Q8NCL4 622 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 TP53INP1Q96A56 240 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CNDP2Q96KP4 475 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 MYRFLQ96LU7 910 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 TUBA1CQ9BQE3 449 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZNF717Q9BY31 904 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CPNE5Q9HCH3 593 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 TRIM39Q9HCM9 518 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 POLE4Q9NR33 117 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 EXD2Q9NVH0 621 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 TESMINQ9Y4I5 508 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 A0A0G2JLL6 359 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ENPP3O14638 875 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 TREHO43280 583 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 NOBOXO60393 691 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 RFPL2O75678 378 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 NADKO95544 446 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 MMP3P08254 477 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 SMIM10L2AP0DMW4 78 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 SMIM10L2BP0DMW5 78 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PRKACAP17612 351 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 DNAJB2P25686 324 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 RFC2P35250 354 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PTGS2P35354 604 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 MTPNP58546 118 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 SLC10A7Q0GE19 358 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 FCHO2Q0JRZ9 810 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 BNIP2Q12982 314 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 POLD3Q15054 466 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 OR4D1Q15615 310 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ATP6AP1Q15904 470 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 RBBP7Q16576 425 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 BNIPLQ7Z465 357 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PRRT2Q7Z6L0 340 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 SCN4BQ8IWT1 228 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ANKRD13AQ8IZ07 590 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CACTIN-AS1Q8N1I8 211 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 OR13J1Q8NGT2 312 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 MYLPFQ96A32 169 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 NRBF2Q96F24 287 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 GLT1D1Q96MS3 346 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PSKH2Q96QS6 385 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms