RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 OR12D3Q9UGF7 316 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 AFF4Q9UHB7 1163 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 LAMA4Q16363 1823 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 EFCAB9A8MZ26 197 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 CASKO14936 926 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ARHGEF15O94989 841 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 TBX4P57082 545 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SRP54P61011 504 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 IRF8Q02556 426 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 GALNT1Q10472 559 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SATL1Q86VE3 508 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 TMEM161BQ8NDZ6 487 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 NSMCE3Q96MG7 304 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 BTBD1Q9H0C5 482 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SLITRK5O94991 958 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TRBC1P01850 177 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ZMYND11Q15326 602 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ATP6AP1Q15904 470 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CA9Q16790 459 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 UNC5AQ6ZN44 842 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 AHSA2Q719I0 299 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 NCSTNQ92542 709 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SNX18Q96RF0 628 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CST11Q9H112 138 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CRISPLD1Q9H336 500 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 C3orf14Q9HBI5 128 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 XPR1Q9UBH6 696 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 FBXL21Q9UKT6 434 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 A0A0J9YYE9 177 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 FGBP02675 491 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ITGB3P05106 788 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 STARD3Q14849 445 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 GSTCDQ8NEC7 633 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CCDC3Q9BQI4 270 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 HOXD8P13378 290 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CDH5P33151 784 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 GLRBP48167 497 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ADAM17P78536 824 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 KLHL24Q6TFL4 600 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SYT12Q8IV01 421 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 PIGXQ8TBF5 258 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TRPC4Q9UBN4 977 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 LRRTM2O43300 516 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CSPG5O95196 566 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 FGF19O95750 216 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 FGFR2P21802 821 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SLC25A52Q3SY17 297 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 RANBP3LQ86VV4 465 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 AIFM2Q9BRQ8 373 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 MARCH2Q9P0N8 246 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SPATA7Q9P0W8 599 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 FABP12A6NFH5 140 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 FBP2O00757 339 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CTC1Q2NKJ3 1217 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 KCTD8Q6ZWB6 473 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 OR52B2Q96RD2 323 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 APBA2Q99767 749 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SLC25A51Q9H1U9 297 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 DCSTAMPQ9H295 470 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 MAGIXQ9H6Y5 334 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ZDHHC7Q9NXF8 308 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 PLA2G4CQ9UP65 541 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 REXO2Q9Y3B8 237 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TRPV2Q9Y5S1 764 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 DBTP11182 482 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 RBL1P28749 1068 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 HALP42357 657 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 GLUD2P49448 558 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 MTMR2Q13614 643 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 DCLRE1AQ6PJP8 1040 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ASTN1O14525 1302 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TTLL8A6PVC2 850 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 NTSR2O95665 410 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 WDPCPO95876 746 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SHBGP04278 402 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SLC2A2P11168 524 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 MGAT1P26572 445 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 FMO1Q01740 532 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CD47Q08722 323 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 BMPR2Q13873 1038 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TIGD2Q4W5G0 525 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 RAB41Q5JT25 222 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF367Q7RTV3 350 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ADCK2Q7Z695 626 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 KBTBD7Q8WVZ9 684 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CXorf40BQ96DE9 158 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 METTL2AQ96IZ6 378 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 GON7Q9BXV9 100 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TFB2MQ9H5Q4 396 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 C8GP07360 202 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 LAMTOR4Q0VGL1 99 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 PCSK7Q16549 785 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SMU1Q2TAY7 513 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TRIM48Q8IWZ4 208 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 USP7Q93009 1102 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 MIPEPQ99797 713 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 POLD4Q9HCU8 107 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ZDHHC4Q9NPG8 344 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms