RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 STX2P32856 288 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 IL9RQ01113 521 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 IFFO1Q0D2I5 559 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SLC10A2Q12908 348 aaPredicted RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 DNAJC3Q13217 504 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 NAB1Q13506 487 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 ENPP2Q13822 863 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 KLHL38Q2WGJ6 581 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 MS4A13Q5J8X5 152 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 MPP7Q5T2T1 576 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 ARHGAP40Q5TG30 622 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 PIK3R6Q5UE93 754 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 BROXQ5VW32 411 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 LAYNQ6UX15 382 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 LINC00523Q86TU6 105 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SETD3Q86TU7 594 aaPredicted RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 ZC3H18Q86VM9 953 aaKnown RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 FAM217AQ8IXS0 508 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 CCDC13Q8IYE1 715 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 PYROXD2Q8N2H3 581 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 ATPAF2Q8N5M1 289 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 ZNF557Q8N988 423 aaPredicted RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 ZNF248Q8NDW4 579 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SNRNP27Q8WVK2 155 aaKnown RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 MAML1Q92585 1016 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SIPA1Q96FS4 1042 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 MED8Q96G25 268 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 P2RY11Q96G91 374 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 CNDP2Q96KP4 475 aaKnown RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 XPO6Q96QU8 1125 aaKnown RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 PRMT1Q99873 361 aaKnown RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SLC12A9Q9BXP2 914 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 GBA3Q9H227 469 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 CDC42EP4Q9H3Q1 356 aaKnown RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 CNOT10Q9H9A5 744 aaKnown RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 CPNE5Q9HCH3 593 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 ANLNQ9NQW6 1124 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 ETNK2Q9NVF9 386 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 PSD3Q9NYI0 1048 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SENP1Q9P0U3 644 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SAE1Q9UBE0 346 aaPredicted RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 LGALS13Q9UHV8 139 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SLC24A2Q9UI40 661 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 HS3ST4Q9Y661 456 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 GON4LQ3T8J9 2241 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SHROOM3Q8TF72 1996 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 DOCK4Q8N1I0 1966 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 COL6A6A6NMZ7 2263 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 SYNJ2BP-COX16A0A087WUM0 186 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 A0A1B0GTQ1 180 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 ARHGAP42A6NI28 874 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 E7EVH7 732 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 F5H5T6 163 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 FAM72CH0Y354 149 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 NPC1O15118 1278 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 MATN3O15232 486 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 MSI1O43347 362 aaKnown RBP6.97□□□□□ -1.29
VPS13A-201ENST00000355766 DFNA5O60443 496 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 CLDN11O75508 207 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 FAM155BO75949 473 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 ANXA9O76027 345 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TMEM63AO94886 807 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 LDOC1O95751 146 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-201ENST00000355766 GSTM1P09488 218 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 IRF1P10914 325 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 ACADMP11310 421 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 PTPN3P26045 913 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 MAGEA4P43358 317 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 VPS41P49754 854 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 COPAP53621 1224 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 BASP1P80723 227 aaKnown RBP6.97□□□□□ -1.29
VPS13A-201ENST00000355766 MVKQ03426 396 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 WASHC5Q12768 1159 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 EFEMP1Q12805 493 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 IFRD2Q12894 506 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-201ENST00000355766 SLC29A2Q14542 456 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 RFTN1Q14699 578 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-201ENST00000355766 LLGL1Q15334 1064 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TRIP13Q15645 432 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TEX44Q53QW1 395 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TNFAIP8L3Q5GJ75 292 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 COLEC12Q5KU26 742 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 ANKRD20A2Q5SQ80 823 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 CEP85LQ5SZL2 805 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 FAM72AQ5TYM5 149 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 ANKRD20A1Q5TYW2 823 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 ANKRD20A3Q5VUR7 823 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 FAM72DQ6L9T8 149 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 NPNTQ6UXI9 565 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 RPTNQ6XPR3 784 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TAOK1Q7L7X3 1001 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 FAM72BQ86X60 149 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 CACUL1Q86Y37 369 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 GATAD2AQ86YP4 633 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TMPRSS6Q8IU80 811 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 NPWQ8N729 165 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 GLIS1Q8NBF1 620 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 FAM76AQ8TAV0 307 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 WBP2Q969T9 261 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms