RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ORC5O43913 435 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 ANXA2P07355 339 aaKnown RBP14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CYP3A7P24462 503 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 ECHS1P30084 290 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 SPAM1P38567 509 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 TSPAN5P62079 268 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 DDR1Q08345 913 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 MPP2Q14168 576 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 SLC26A9Q7LBE3 791 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CNTD1Q8N815 330 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 NETO2Q8NC67 525 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 SRFBP1Q8NEF9 429 aaKnown RBP14.75□□□□□ -0.05
LMX1B-201ENST00000355497 ATP6V1C2Q8NEY4 427 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 METTL21AQ8WXB1 218 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 ERMAPQ96PL5 475 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-201ENST00000355497 GFM1Q96RP9 751 aaKnown RBP14.75□□□□□ -0.05
LMX1B-201ENST00000355497 RNF208Q9H0X6 261 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 ZNF180Q9UJW8 692 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 TRIM17Q9Y577 477 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 OR6C75A6NL08 312 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 PER2O15055 1255 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CLDN11O75508 207 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CRYBB1P53674 252 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-201ENST00000355497 MADCAM1Q13477 382 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CWF19L1Q69YN2 538 aaKnown RBP14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CLNKQ7Z7G1 428 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 MON1AQ86VX9 555 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 UNC5BQ8IZJ1 945 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 OR5B17Q8NGF7 314 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 ALG2Q9H553 416 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 DDX4Q9NQI0 724 aaKnown RBP14.75□□□□□ -0.05
LMX1B-201ENST00000355497 MIOSQ9NXC5 875 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 COLEC10Q9Y6Z7 277 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 EPHB6O15197 1021 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 C2P06681 752 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CCR3P51677 355 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CDKL1Q00532 357 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 ECT2LQ008S8 904 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 RNF220Q5VTB9 566 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 LRRC52Q8N7C0 313 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 RBM15BQ8NDT2 890 aaKnown RBP14.75□□□□□ -0.05
LMX1B-201ENST00000355497 OR4K2Q8NGD2 314 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 GPR152Q8TDT2 470 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 IDI2Q9BXS1 227 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 NMUR2Q9GZQ4 415 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 ABCG4Q9H172 646 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 OSER1Q9NX31 292 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 UBIAD1Q9Y5Z9 338 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 A0A1W2PQH9 124 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 GTF2H2Q13888 395 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 EFR3AQ14156 821 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 GTF2H2CQ6P1K8 395 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 MED27Q6P2C8 311 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CXCL17Q6UXB2 119 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CENPNQ96H22 339 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-201ENST00000355497 CALML5Q9NZT1 146 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 WNT10BO00744 389 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 STK16O75716 305 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 GPIP06744 558 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 ATF4P18848 351 aaPredicted RBP14.74□□□□□ -0.05
LMX1B-201ENST00000355497 MXD1Q05195 221 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 IL23RQ5VWK5 629 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 CATSPERGQ6ZRH7 1159 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 CRYBG2Q8N1P7 616 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 ARMC10Q8N2F6 343 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 C11orf65Q8NCR3 313 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 ACOT12Q8WYK0 555 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 UFD1Q92890 307 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 IPPKQ9H8X2 491 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 MARCH7Q9H992 704 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 DERAQ9Y315 318 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 PCDHGA10Q9Y5H3 936 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 MYPNQ86TC9 1320 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 TECPR2O15040 1411 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 EME2A4GXA9 379 aaPredicted RBP14.74□□□□□ -0.05
LMX1B-201ENST00000355497 CPSF4LA6NMK7 179 aaKnown RBP14.74□□□□□ -0.05
LMX1B-201ENST00000355497 MSCO60682 206 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 AZGP1P25311 298 aaKnown RBP14.74□□□□□ -0.05
LMX1B-201ENST00000355497 CMPK1P30085 196 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 HOXC12P31275 282 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 VSIG10LQ86VR7 867 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 AMIGO1Q86WK6 493 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 SLITRK4Q8IW52 837 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 CFAP52Q8N1V2 620 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 NAT16Q8N8M0 369 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 NODALQ96S42 347 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 FKBP7Q9Y680 259 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 FAM155BO75949 473 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 COL6A1P12109 1028 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 IDSP22304 550 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 GPR158Q5T848 1215 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 USP30Q70CQ3 517 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 LINGO2Q7L985 606 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 STRADAQ7RTN6 431 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 OTOP3Q7RTS5 596 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 SPERTQ8NA61 448 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 KAZALD1Q96I82 304 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 ZNF570Q96NI8 536 aa14.74□□□□□ -0.05
LMX1B-201ENST00000355497 LHX5Q9H2C1 402 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms