RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CETN2P41208 172 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 CTSOP43234 321 aaPredicted RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 NUDT2P50583 147 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 C1QBPQ07021 282 aaKnown RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 SPCS2Q15005 226 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 SH2D4BQ5SQS7 431 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 FOXR2Q6PJQ5 311 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 LCLAT1Q6UWP7 414 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 PPP4R3CPQ6ZMV5 832 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 GOLGA6L1Q8N7Z2 621 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 SPPL2BQ8TCT7 592 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 IRGQQ8WZA9 623 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 VPS39Q96JC1 886 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 GPA33Q99795 319 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 RAB17Q9H0T7 212 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 SLC28A3Q9HAS3 691 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 ELOVL2Q9NXB9 296 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 CORO1CQ9ULV4 474 aaPredicted RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 PADI3Q9ULW8 664 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 RAD54BQ9Y620 910 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 CDY2AQ9Y6F7 541 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 TENM3Q9P273 2699 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 TEX46H3BTG2 121 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 PIGRP01833 764 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 SLC7A2P52569 658 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 FAM187BQ17R55 369 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 XKR3Q5GH77 459 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 RTP2Q5QGT7 225 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 C8orf82Q6P1X6 216 aaPredicted RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 RFX6Q8HWS3 928 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 FAM47BQ8NA70 645 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 ACBD4Q8NC06 268 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 BEST2Q8NFU1 509 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 OR6B3Q8NGW1 331 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 PNPT1Q8TCS8 783 aaKnown RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 PROKR1Q8TCW9 393 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 RNF139Q8WU17 664 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 TMEM174Q8WUU8 243 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 GFM2Q969S9 779 aaKnown RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 CLDN23Q96B33 292 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 FEM1AQ9BSK4 669 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 FKRPQ9H9S5 495 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 IGSF5Q9NSI5 407 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 CACNA2D2Q9NY47 1150 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 INTS6Q9UL03 887 aaKnown RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 CCL26Q9Y258 94 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 EIF3LQ9Y262 564 aaKnown RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 CCL27Q9Y4X3 112 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 CHD3Q12873 2000 aaKnown RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 A0A0U1RQF3 1178 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 A0A0X1KG70 313 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 ZNF839A8K0R7 811 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 PIRO00625 290 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 EI24O14681 340 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 ANKRD28O15084 1053 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 LINC00032P0C843 101 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 CRABP2P29373 138 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 HADHAP40939 763 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 SOX9P48436 509 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 SLC1A6P48664 564 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 MEP1AQ16819 746 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 DUOXA2Q1HG44 320 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 C6orf183Q5T699 404 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 PID1Q7Z2X4 250 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 ZNF410Q86VK4 478 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 CCNYL1Q8N7R7 359 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 BHLHE22Q8NFJ8 381 aaPredicted RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 BPIFB6Q8NFQ5 453 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 PIP4K2CQ8TBX8 421 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 LRRC8CQ8TDW0 803 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 DCUN1D1Q96GG9 259 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 ZNF347Q96SE7 839 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 YY1AP1Q9H869 796 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 S100A14Q9HCY8 104 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 PRG3Q9Y2Y8 225 aaPredicted RBP5.57□□□□□ -1.52
CD47-201ENST00000355354 RWDD3Q9Y3V2 267 aa5.57□□□□□ -1.52
CD47-201ENST00000355354 SF3B1O75533 1304 aaKnown RBP eCLIP5.56□□□□□ -1.523e-6■■■■□ 20.7
CD47-201ENST00000355354 ERI2A8K979 691 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 CD72P21854 359 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 CD52P31358 61 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 PAPOLAP51003 745 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 SLC5A3P53794 718 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 STARD6P59095 220 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 CALCOCO2Q13137 446 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 CSHL1Q14406 222 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ITIH4Q14624 930 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 IMPG1Q17R60 797 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 CYBRD1Q53TN4 286 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 COLGALT2Q8IYK4 626 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 MIER2Q8N344 545 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 CBR4Q8N4T8 237 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 KLHL23Q8NBE8 558 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 FBXO22Q8NEZ5 403 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 BBS10Q8TAM1 723 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ACDQ96AP0 544 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 E2F7Q96AV8 911 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 COLEC11Q9BWP8 271 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ENKD1Q9H0I2 346 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 TMEM161AQ9NX61 479 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 MUTYHQ9UIF7 546 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms