RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 MYO1HQ8N1T3 1032 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 SLAIN1Q8ND83 568 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 NCSTNQ92542 709 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 ZNF382Q96SR6 550 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 TRIM54Q9BYV2 358 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 BRINP2Q9C0B6 783 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 EPB41L1Q9H4G0 881 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 PLK2Q9NYY3 685 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 NUDT4Q9NZJ9 180 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 ACTR3BQ9P1U1 418 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 HSFX1Q9UBD0 423 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 DHRS7Q9Y394 339 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 OR51B4Q9Y5P0 310 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 ZFC3H1O60293 1989 aaKnown RBP21.53■■□□□ 1.04
SHMT1-202ENST00000352886 MRPL19P49406 292 aaKnown RBP21.53■■□□□ 1.04
SHMT1-202ENST00000352886 ERVPABLB-1P60509 514 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 CDH18Q13634 790 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 RABL3Q5HYI8 236 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 TPGS2Q68CL5 300 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 LCN8Q6JVE9 175 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 LETMD1Q6P1Q0 360 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 FAM151BQ6UXP7 276 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 ZBTB49Q6ZSB9 765 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 TMEM150AQ86TG1 271 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 CAMK1DQ8IU85 385 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 ANKFN1Q8N957 763 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 FNDC5Q8NAU1 212 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 TMEM125Q96AQ2 219 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 MYO19Q96H55 970 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 MAGEE1Q9HCI5 957 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 RIC8BQ9NVN3 520 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 NDUFA13Q9P0J0 144 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 CCDC154A6NI56 674 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 PRRG1O14668 218 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 BMP2P12643 396 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 CLCN2P51788 898 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 INPP5AQ14642 412 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 C18orf21Q32NC0 220 aaPredicted RBP21.52■■□□□ 1.04
SHMT1-202ENST00000352886 C6orf136Q5SQH8 315 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 ARMC12Q5T9G4 340 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 DNAJB7Q7Z6W7 309 aaPredicted RBP21.52■■□□□ 1.04
SHMT1-202ENST00000352886 IFNEQ86WN2 208 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 METTL25Q8N6Q8 603 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 HJURPQ8NCD3 748 aaPredicted RBP21.52■■□□□ 1.04
SHMT1-202ENST00000352886 CAPNS2Q96L46 248 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 GRIP2Q9C0E4 1043 aa21.52■■□□□ 1.04
SHMT1-202ENST00000352886 TYW5A2RUC4 315 aaKnown RBP21.51■■□□□ 1.03
SHMT1-202ENST00000352886 ARPC2O15144 300 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 BMP1P13497 986 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 CASP2P42575 452 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 POLR2JP52435 117 aaKnown RBP21.51■■□□□ 1.03
SHMT1-202ENST00000352886 TXNL4AP83876 142 aaKnown RBP21.51■■□□□ 1.03
SHMT1-202ENST00000352886 ZXDBP98169 803 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 RNF11Q9Y3C5 154 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 PCDHB1Q9Y5F3 818 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 SOCS2O14508 198 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 SYNCRIPO60506 623 aaKnown RBP21.51■■□□□ 1.03
SHMT1-202ENST00000352886 EEDO75530 441 aaKnown RBP21.51■■□□□ 1.03
SHMT1-202ENST00000352886 PGLSO95336 258 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 PRAMEF1O95521 474 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 SOD2P04179 222 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 PSMA4P25789 261 aaKnown RBP21.51■■□□□ 1.03
SHMT1-202ENST00000352886 PRKCQQ04759 706 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 FUT11Q495W5 492 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 TIGD2Q4W5G0 525 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 ATP6AP1LQ52LC2 224 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 PDCD4Q53EL6 469 aaKnown RBP21.51■■□□□ 1.03
SHMT1-202ENST00000352886 SPOUT1Q5T280 376 aaKnown RBP21.51■■□□□ 1.03
SHMT1-202ENST00000352886 PTRHD1Q6GMV3 140 aaKnown RBP21.51■■□□□ 1.03
SHMT1-202ENST00000352886 Q6ZSR9 355 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 ADAMTS19Q8TE59 1207 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 PIH1D2Q8WWB5 315 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 CIPCQ9C0C6 399 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 HIPK3Q9H422 1215 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 ALG2Q9H553 416 aa21.51■■□□□ 1.03
SHMT1-202ENST00000352886 HNRNPRO43390 633 aaKnown RBP21.5■■□□□ 1.03
SHMT1-202ENST00000352886 PPP3CCP48454 512 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 NADK2Q4G0N4 442 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 SBSNQ6UWP8 590 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 CERS6Q6ZMG9 384 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 TMEM199Q8N511 208 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 ARL14EPQ8N8R7 260 aaPredicted RBP21.5■■□□□ 1.03
SHMT1-202ENST00000352886 ALG14Q96F25 216 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 PDLIM5Q96HC4 596 aaKnown RBP21.5■■□□□ 1.03
SHMT1-202ENST00000352886 HBEGFQ99075 208 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 CCT7Q99832 543 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 TMEM79Q9BSE2 394 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 BOCQ9BWV1 1114 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 CLPBQ9H078 707 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 SLAMF8Q9P0V8 285 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 SUN2Q9UH99 717 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 LEF1Q9UJU2 399 aaPredicted RBP21.5■■□□□ 1.03
SHMT1-202ENST00000352886 COMMD3-BMI1R4GMX3 469 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 SAC3D1A6NKF1 404 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 HTRA2O43464 458 aaPredicted RBP21.5■■□□□ 1.03
SHMT1-202ENST00000352886 TPST1O60507 370 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 CXCL10P02778 98 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 CAPN1P07384 714 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 ITGB6P18564 788 aa21.5■■□□□ 1.03
SHMT1-202ENST00000352886 IL12AP29459 219 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms