RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 HTR1BP28222 390 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 AQP4P55087 323 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 KLHL12Q53G59 568 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 POLR3BQ9NW08 1133 aaPredicted RBP15.87■□□□□ 0.13
PTPN11-201ENST00000351677 MIOSQ9NXC5 875 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 MAP4K5Q9Y4K4 846 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 PTPRJQ12913 1337 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3DA0A087WVF3 549 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3IA0A087WXS9 549 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3EA0A087X179 549 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3KA0A087X1G2 549 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 DYTNA2CJ06 578 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3FA6NER0 549 aaPredicted RBP15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3LB9A6J9 549 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 SLC7A4O43246 635 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TCEA3O75764 348 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 NADKO95544 446 aaPredicted RBP15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3HP0C7X1 549 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 CTSKP43235 329 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 C2orf80Q0P641 193 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 PYDC2Q56P42 97 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3GQ6DHY5 549 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3CQ6IPX1 549 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 TBC1D3Q8IZP1 549 aaPredicted RBP15.87■□□□□ 0.13
PTPN11-201ENST00000351677 SNPHO15079 494 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 LRRC73Q5JTD7 316 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 PPP1R14AQ96A00 147 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 AASDHPPTQ9NRN7 309 aa15.87■□□□□ 0.13
PTPN11-201ENST00000351677 URADA6NGE7 173 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 HLA-DQB2P05538 268 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 SLC25A11Q02978 314 aaKnown RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 PRKD1Q15139 912 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 TMEM198Q66K66 360 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 CFAP206Q8IYR0 622 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 OR13C4Q8NGS5 318 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 MIR1-1HGQ9H1L0 117 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 EFNA1P20827 205 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 TPP2P29144 1249 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 SLC26A3P40879 764 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 MSS51Q4VC12 460 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 HFE2Q6ZVN8 426 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 OTOP2Q7RTS6 562 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 NPAS4Q8IUM7 802 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 AP2M1Q96CW1 435 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 FAM83DQ9H4H8 585 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 SLC27A6Q9Y2P4 619 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 ANXA4P09525 319 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 PSMD8P48556 350 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 GPX6P59796 221 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 KLF1Q13351 362 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 ACSBG2Q5FVE4 666 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 KIAA0930Q6ICG6 404 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 SMYD1Q8NB12 490 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 IRAK2O43187 625 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 UGT2B11O75310 529 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 COL6A1P12109 1028 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 TAB1Q15750 504 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 TMEM110Q86TL2 294 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 OR52J3Q8NH60 311 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 OR10A6Q8NH74 314 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 EBF3Q9H4W6 596 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 CCNB1IP1Q9NPC3 277 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 SMPD3Q9NY59 655 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 CACNB4O00305 520 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 BCKDKO14874 412 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 JAK1P23458 1154 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 C9orf64Q5T6V5 341 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 RAD51AP1Q96B01 352 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 ZNF395Q9H8N7 513 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-201ENST00000351677 SH3GLB1Q9Y371 365 aa15.86■□□□□ 0.13
PTPN11-201ENST00000351677 TMCC2O75069 709 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 THRBP10828 461 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 RPS9P46781 194 aaKnown RBP15.85■□□□□ 0.13
PTPN11-201ENST00000351677 SF1Q15637 639 aaKnown RBP15.85■□□□□ 0.13
PTPN11-201ENST00000351677 SLC34A3Q8N130 599 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 FBXO22Q8NEZ5 403 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 AIF1LQ9BQI0 150 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 DGKBQ9Y6T7 804 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 MYH2Q9UKX2 1941 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 CCDC162PA2VCL2 907 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 PTPN5P54829 565 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 CHIT1Q13231 466 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 OLIG2Q13516 323 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 KCNJ11Q14654 390 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 TAF1AQ15573 450 aaPredicted RBP15.85■□□□□ 0.13
PTPN11-201ENST00000351677 THAP5Q7Z6K1 395 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 XAGE5Q8WWM1 108 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 BTBD9Q96Q07 612 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 FCRL5Q96RD9 977 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 HAPLN3Q96S86 360 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 RBM4BQ9BQ04 359 aaKnown RBP15.85■□□□□ 0.13
PTPN11-201ENST00000351677 TCF25Q9BQ70 676 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 RBM4Q9BWF3 364 aaKnown RBP15.85■□□□□ 0.13
PTPN11-201ENST00000351677 DEC1Q9P2X7 70 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 LGR5O75473 907 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 SLCO6A1Q86UG4 719 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 ING5Q8WYH8 240 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 TRBV23OR9-2A0A075B6M9 112 aa15.85■□□□□ 0.13
PTPN11-201ENST00000351677 NDUFS2O75306 463 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms