RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 CLYBLQ8N0X4 340 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 CLHC1Q8NHS4 586 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 METTL6Q8TCB7 284 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 BIRC8Q96P09 236 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 DNAAF2Q9NVR5 837 aaKnown RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 INTS6Q9UL03 887 aaKnown RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 MED16Q9Y2X0 877 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 PBLDP30039 288 aaPredicted RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 IL27RAQ6UWB1 636 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 ZBTB46Q86UZ6 589 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 ZSWIM9Q86XI8 627 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 FNDC5Q8NAU1 212 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 SCAMP4Q969E2 229 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 FUBP1Q96AE4 644 aaKnown RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 PBXIP1Q96AQ6 731 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 ZFP14Q9HCL3 533 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 PRKAG2Q9UGJ0 569 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 A0A0J9YYE9 177 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 NPIPB15A6NHN6 443 aaPredicted RBP13.74□□□□□ -0.21
TRIM4-201ENST00000349062 GRXCR1A8MXD5 290 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 ANGPT2O15123 496 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 HLA-FP30511 346 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
TRIM4-201ENST00000349062 YBX1P67809 324 aaKnown RBP13.74□□□□□ -0.21
TRIM4-201ENST00000349062 PLEKHG6Q3KR16 790 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 REP15Q6BDI9 236 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 FBXL19Q6PCT2 694 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
TRIM4-201ENST00000349062 DTNBP1Q96EV8 351 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 PIKFYVEQ9Y2I7 2098 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 PRMT5O14744 637 aaPredicted RBP13.74□□□□□ -0.21
TRIM4-201ENST00000349062 TLL1O43897 1013 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 GLUD1P00367 558 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 IRS1P35568 1242 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 C6orf52Q5T4I8 152 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 METTL21CQ5VZV1 264 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 DPY19L3Q6ZPD9 716 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 GRASPQ7Z6J2 395 aaPredicted RBP13.74□□□□□ -0.21
TRIM4-201ENST00000349062 BADQ92934 168 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 TDRKHQ9Y2W6 561 aaKnown RBP13.74□□□□□ -0.21
TRIM4-201ENST00000349062 SNRPB2P08579 225 aaKnown RBP13.74□□□□□ -0.21
TRIM4-201ENST00000349062 ME2P23368 584 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 HTR6P50406 440 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 HK3P52790 923 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 NADK2Q4G0N4 442 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 TIGD2Q4W5G0 525 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 SETMARQ53H47 684 aaPredicted RBP13.74□□□□□ -0.21
TRIM4-201ENST00000349062 MILR1Q7Z6M3 343 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 SYVN1Q86TM6 617 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 RIN3Q8TB24 985 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 ITFG2Q969R8 447 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 ATOH8Q96SQ7 321 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 IL26Q9NPH9 171 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 WWOXQ9NZC7 414 aa13.74□□□□□ -0.21
TRIM4-201ENST00000349062 FRMPD3Q5JV73 1810 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 ANKRD36A6QL64 1941 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 ABHD14A-ACY1A0A1B0GW23 586 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 OR2AG2A6NM03 316 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 ZNF839A8K0R7 811 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 UPK3BL1B0FP48 263 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 UPK3BL2E5RIL1 263 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 S100BP04271 92 aaPredicted RBP13.73□□□□□ -0.21
TRIM4-201ENST00000349062 XPAP23025 273 aaPredicted RBP13.73□□□□□ -0.21
TRIM4-201ENST00000349062 RECQLP46063 649 aaPredicted RBP13.73□□□□□ -0.21
TRIM4-201ENST00000349062 TLR1Q15399 786 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 LY6G5CQ5SRR4 150 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 LRRC66Q68CR7 880 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 KLHDC8BQ8IXV7 354 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 TRIML2Q8N7C3 387 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 LMNTD1Q8N9Z9 388 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 FAM110BQ8TC76 370 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 CD200R1Q8TD46 325 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 MYRFLQ96LU7 910 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 KLHL32Q96NJ5 620 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 TUBB1Q9H4B7 451 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 SNX13Q9Y5W8 968 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 GLYATL1P3A0A0U1RQE8 302 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 FAM149AA5PLN7 773 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 PGLSO95336 258 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 IGSF6O95976 241 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 ADH1AP07327 375 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 EPCAMP16422 314 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 ITGALP20701 1170 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 OGNP20774 298 aaKnown RBP13.73□□□□□ -0.21
TRIM4-201ENST00000349062 FOXD4Q12950 439 aaPredicted RBP13.73□□□□□ -0.21
TRIM4-201ENST00000349062 NR6A1Q15406 480 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 TMC5Q6UXY8 1006 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 CHST9Q7L1S5 443 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 LCA5Q86VQ0 697 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 TCEAL8Q8IYN2 117 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 C11orf49Q9H6J7 331 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 IL17CQ9P0M4 197 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 FAF1Q9UNN5 650 aaPredicted RBP13.73□□□□□ -0.21
TRIM4-201ENST00000349062 REV3LO60673 3130 aa13.73□□□□□ -0.21
TRIM4-201ENST00000349062 INPP4BO15327 924 aa13.72□□□□□ -0.21
TRIM4-201ENST00000349062 SYNCRIPO60506 623 aaKnown RBP13.72□□□□□ -0.21
TRIM4-201ENST00000349062 CAPN1P07384 714 aa13.72□□□□□ -0.21
TRIM4-201ENST00000349062 BPIP17213 487 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms