RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 ARRDC4Q8NCT1 418 aa17.64■□□□□ 0.41
APP-202ENST00000348990 OR2T12Q8NG77 320 aa17.64■□□□□ 0.41
APP-202ENST00000348990 CCDC97Q96F63 343 aaPredicted RBP17.64■□□□□ 0.41
APP-202ENST00000348990 C16orf70Q9BSU1 422 aa17.64■□□□□ 0.41
APP-202ENST00000348990 UGT2B28Q9BY64 529 aa17.64■□□□□ 0.41
APP-202ENST00000348990 ASPSCR1Q9BZE9 553 aa17.64■□□□□ 0.41
APP-202ENST00000348990 NPEPPSL1A6NEC2 478 aa17.64■□□□□ 0.41
APP-202ENST00000348990 FADS2O95864 444 aaKnown RBP17.64■□□□□ 0.41
APP-202ENST00000348990 FGF4P08620 206 aa17.64■□□□□ 0.41
APP-202ENST00000348990 ALOX5P09917 674 aa17.64■□□□□ 0.41
APP-202ENST00000348990 JUNBP17275 347 aaPredicted RBP17.64■□□□□ 0.41
APP-202ENST00000348990 CLK1P49759 484 aaKnown RBP17.64■□□□□ 0.41
APP-202ENST00000348990 RENBPP51606 427 aa17.64■□□□□ 0.41
APP-202ENST00000348990 IFITM3Q01628 133 aa17.64■□□□□ 0.41
APP-202ENST00000348990 CTU2Q2VPK5 515 aaKnown RBP17.64■□□□□ 0.41
APP-202ENST00000348990 MARCH8Q5T0T0 291 aa17.64■□□□□ 0.41
APP-202ENST00000348990 PM20D1Q6GTS8 502 aa17.64■□□□□ 0.41
APP-202ENST00000348990 ELMO1Q92556 727 aa17.64■□□□□ 0.41
APP-202ENST00000348990 ACTR8Q9H981 624 aa17.64■□□□□ 0.41
APP-202ENST00000348990 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.64■□□□□ 0.414e-7■■■■□ 20.6
APP-202ENST00000348990 UTS2RQ9UKP6 389 aa17.64■□□□□ 0.41
APP-202ENST00000348990 SLC7A4O43246 635 aa17.63■□□□□ 0.41
APP-202ENST00000348990 VPS4BO75351 444 aa17.63■□□□□ 0.41
APP-202ENST00000348990 ANGPTL1O95841 491 aa17.63■□□□□ 0.41
APP-202ENST00000348990 UGT2B4P06133 528 aa17.63■□□□□ 0.41
APP-202ENST00000348990 HTR1EP28566 365 aa17.63■□□□□ 0.41
APP-202ENST00000348990 UGT3A1Q6NUS8 523 aa17.63■□□□□ 0.41
APP-202ENST00000348990 BNIPLQ7Z465 357 aa17.63■□□□□ 0.41
APP-202ENST00000348990 C14orf80Q86SX3 495 aa17.63■□□□□ 0.41
APP-202ENST00000348990 PHYKPLQ8IUZ5 450 aa17.63■□□□□ 0.41
APP-202ENST00000348990 LINC01465Q8N7H1 131 aa17.63■□□□□ 0.41
APP-202ENST00000348990 METTL6Q8TCB7 284 aa17.63■□□□□ 0.41
APP-202ENST00000348990 CNDP2Q96KP4 475 aaKnown RBP17.63■□□□□ 0.41
APP-202ENST00000348990 C6orf62Q9GZU0 229 aaPredicted RBP17.63■□□□□ 0.41
APP-202ENST00000348990 ITM2CQ9NQX7 267 aa17.63■□□□□ 0.41
APP-202ENST00000348990 AIG1Q9NVV5 245 aa17.63■□□□□ 0.41
APP-202ENST00000348990 ENPP5Q9UJA9 477 aa17.63■□□□□ 0.41
APP-202ENST00000348990 CCDC162PA2VCL2 907 aa17.63■□□□□ 0.41
APP-202ENST00000348990 ZNF37AP17032 561 aaPredicted RBP17.63■□□□□ 0.41
APP-202ENST00000348990 TCEA1P23193 301 aaKnown RBP17.63■□□□□ 0.41
APP-202ENST00000348990 SF3B4Q15427 424 aaKnown RBP eCLIP17.63■□□□□ 0.41
APP-202ENST00000348990 TRIP4Q15650 581 aaPredicted RBP17.63■□□□□ 0.41
APP-202ENST00000348990 MOB2Q70IA6 237 aa17.63■□□□□ 0.41
APP-202ENST00000348990 SYVN1Q86TM6 617 aa17.63■□□□□ 0.41
APP-202ENST00000348990 SCN4BQ8IWT1 228 aa17.63■□□□□ 0.41
APP-202ENST00000348990 RAVER1Q8IY67 606 aaKnown RBP17.63■□□□□ 0.41
APP-202ENST00000348990 SLC47A1Q96FL8 570 aa17.63■□□□□ 0.41
APP-202ENST00000348990 SMARCD1Q96GM5 515 aa17.63■□□□□ 0.41
APP-202ENST00000348990 AMBRA1Q9C0C7 1298 aa17.63■□□□□ 0.41
APP-202ENST00000348990 SLC25A51Q9H1U9 297 aa17.63■□□□□ 0.41
APP-202ENST00000348990 AGO3Q9H9G7 860 aaKnown RBP17.63■□□□□ 0.41
APP-202ENST00000348990 ERVK-18Q9QC07 812 aa17.63■□□□□ 0.41
APP-202ENST00000348990 IPPQ9Y573 584 aa17.63■□□□□ 0.41
APP-202ENST00000348990 LOC100130705A0A1B0GUX0 176 aa17.63■□□□□ 0.41
APP-202ENST00000348990 H0Y626 953 aa17.63■□□□□ 0.41
APP-202ENST00000348990 SLC1A7O00341 560 aa17.63■□□□□ 0.41
APP-202ENST00000348990 NDUFS3O75489 264 aa17.63■□□□□ 0.41
APP-202ENST00000348990 ECI2O75521 394 aa17.63■□□□□ 0.41
APP-202ENST00000348990 EEDO75530 441 aaKnown RBP17.63■□□□□ 0.41
APP-202ENST00000348990 PRKD3O94806 890 aa17.63■□□□□ 0.41
APP-202ENST00000348990 TRIM16O95361 564 aa17.63■□□□□ 0.41
APP-202ENST00000348990 BMP4P12644 408 aa17.63■□□□□ 0.41
APP-202ENST00000348990 MTHFD2P13995 350 aa17.63■□□□□ 0.41
APP-202ENST00000348990 IL12AP29459 219 aa17.63■□□□□ 0.41
APP-202ENST00000348990 TRPC1P48995 793 aa17.63■□□□□ 0.41
APP-202ENST00000348990 ZNF549Q6P9A3 640 aa17.63■□□□□ 0.41
APP-202ENST00000348990 RBM23Q86U06 439 aaKnown RBP17.63■□□□□ 0.41
APP-202ENST00000348990 OR6J1Q8NGC5 347 aa17.63■□□□□ 0.41
APP-202ENST00000348990 MYLPFQ96A32 169 aa17.63■□□□□ 0.41
APP-202ENST00000348990 MRM3Q9HC36 420 aaKnown RBP17.63■□□□□ 0.41
APP-202ENST00000348990 TLR9Q9NR96 1032 aa17.63■□□□□ 0.41
APP-202ENST00000348990 ZMYM5Q9UJ78 669 aa17.63■□□□□ 0.41
APP-202ENST00000348990 C3orf18Q9UK00 162 aa17.63■□□□□ 0.41
APP-202ENST00000348990 MEIS3P2A8K0S8 358 aa17.62■□□□□ 0.41
APP-202ENST00000348990 TBX1O43435 398 aa17.62■□□□□ 0.41
APP-202ENST00000348990 ENO2P09104 434 aaPredicted RBP17.62■□□□□ 0.41
APP-202ENST00000348990 DARSP14868 501 aaKnown RBP17.62■□□□□ 0.41
APP-202ENST00000348990 PIK3CGP48736 1102 aa17.62■□□□□ 0.41
APP-202ENST00000348990 RAD51Q06609 339 aa17.62■□□□□ 0.41
APP-202ENST00000348990 GCNT7Q6ZNI0 430 aa17.62■□□□□ 0.41
APP-202ENST00000348990 P2RY8Q86VZ1 359 aa17.62■□□□□ 0.41
APP-202ENST00000348990 EID3Q8N140 333 aa17.62■□□□□ 0.41
APP-202ENST00000348990 CLIP4Q8N3C7 705 aa17.62■□□□□ 0.41
APP-202ENST00000348990 BPIFB1Q8TDL5 484 aa17.62■□□□□ 0.41
APP-202ENST00000348990 TMEM40Q8WWA1 233 aa17.62■□□□□ 0.41
APP-202ENST00000348990 AURKBQ96GD4 344 aaPredicted RBP17.62■□□□□ 0.41
APP-202ENST00000348990 CGREF1Q99674 301 aa17.62■□□□□ 0.41
APP-202ENST00000348990 MAF1Q9H063 256 aa17.62■□□□□ 0.41
APP-202ENST00000348990 MARCH7Q9H992 704 aa17.62■□□□□ 0.41
APP-202ENST00000348990 EIF2B4Q9UI10 523 aaKnown RBP17.62■□□□□ 0.41
APP-202ENST00000348990 TULP3O75386 442 aa17.62■□□□□ 0.41
APP-202ENST00000348990 JRKO75564 520 aa17.62■□□□□ 0.41
APP-202ENST00000348990 GJB3O75712 270 aa17.62■□□□□ 0.41
APP-202ENST00000348990 RPS3AP61247 264 aaKnown RBP17.62■□□□□ 0.41
APP-202ENST00000348990 SIRPB2Q5JXA9 342 aa17.62■□□□□ 0.41
APP-202ENST00000348990 MILR1Q7Z6M3 343 aa17.62■□□□□ 0.41
APP-202ENST00000348990 PTRH1Q86Y79 214 aaKnown RBP17.62■□□□□ 0.41
APP-202ENST00000348990 CCDC103Q8IW40 242 aa17.62■□□□□ 0.41
APP-202ENST00000348990 PPTC7Q8NI37 304 aa17.62■□□□□ 0.41
APP-202ENST00000348990 TMEM209Q96SK2 561 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms