RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 WISP3O95389 354 aaPredicted RBP15.72■□□□□ 0.11
HMGA1-202ENST00000347617 ALPLP05186 524 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 RAP2AP10114 183 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 KCNA5P22460 613 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 CYP2C18P33260 490 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 HTR7P34969 479 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 MAGEA11P43364 429 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 YAP1P46937 504 aaKnown RBP15.72■□□□□ 0.11
HMGA1-202ENST00000347617 FAM98BQ52LJ0 330 aaKnown RBP15.72■□□□□ 0.11
HMGA1-202ENST00000347617 SLC16A12Q6ZSM3 486 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 R3HCC1LQ7Z5L2 792 aaKnown RBP15.72■□□□□ 0.11
HMGA1-202ENST00000347617 PHYKPLQ8IUZ5 450 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 TP53INP2Q8IXH6 220 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 NETO2Q8NC67 525 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 HASPINQ8TF76 798 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 TWIST2Q8WVJ9 160 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 HPS1Q92902 700 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 BIRC7Q96CA5 298 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 C8orf48Q96LL4 319 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 CHID1Q9BWS9 393 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 NUSAP1Q9BXS6 441 aaKnown RBP15.72■□□□□ 0.11
HMGA1-202ENST00000347617 GLOD4Q9HC38 313 aa15.72■□□□□ 0.11
HMGA1-202ENST00000347617 OAS3Q9Y6K5 1087 aaKnown RBP15.72■□□□□ 0.11
HMGA1-202ENST00000347617 PTPRDP23468 1912 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 MIA3Q5JRA6 1907 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-202ENST00000347617 H0Y858 1186 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 UBFD1O14562 309 aaKnown RBP15.71■□□□□ 0.11
HMGA1-202ENST00000347617 MRPS14O60783 128 aaKnown RBP15.71■□□□□ 0.11
HMGA1-202ENST00000347617 USP17L7P0C7H9 530 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 CCDC159P0C7I6 412 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 ELK4P28324 431 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 ADRA1AP35348 466 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 MLLT10P55197 1068 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 TPD52P55327 224 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-202ENST00000347617 RCAN2Q14206 197 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 POU6F1Q14863 301 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 SPCS2Q15005 226 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 KCNJ8Q15842 424 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 SYPL2Q5VXT5 272 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 CLEC6AQ6EIG7 209 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 DENND5AQ6IQ26 1287 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 GPRIN1Q7Z2K8 1008 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 ZCCHC7Q8N3Z6 543 aaKnown RBP15.71■□□□□ 0.11
HMGA1-202ENST00000347617 SPATA6LQ8N4H0 392 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 NPWQ8N729 165 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 PJA1Q8NG27 643 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 ZNF566Q969W8 418 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 IL12RB2Q99665 862 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 ADNPQ9H2P0 1102 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 POPDC3Q9HBV1 291 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 FBRSL1Q9HCM7 1045 aaKnown RBP15.71■□□□□ 0.11
HMGA1-202ENST00000347617 WDR6Q9NNW5 1121 aaKnown RBP15.71■□□□□ 0.11
HMGA1-202ENST00000347617 TLR9Q9NR96 1032 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 ATP11BQ9Y2G3 1177 aa15.71■□□□□ 0.11
HMGA1-202ENST00000347617 ZNF99A8MXY4 864 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-202ENST00000347617 FAM47E-STBD1D6RA91 191 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 IFRD1O00458 451 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-202ENST00000347617 TNFRSF10BO14763 440 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 MSI1O43347 362 aaKnown RBP15.7■□□□□ 0.1
HMGA1-202ENST00000347617 NDUFS2O75306 463 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 GMNNO75496 209 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 SERPINB1P30740 379 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 SHMT2P34897 504 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 TLE2Q04725 743 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 EMX2Q04743 252 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 CAPRIN1Q14444 709 aaKnown RBP15.7■□□□□ 0.1
HMGA1-202ENST00000347617 RFX4Q33E94 735 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 ZNF362Q5T0B9 420 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-202ENST00000347617 HECTD2Q5U5R9 776 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 TUBA3EQ6PEY2 450 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 PRSS48Q7RTY5 328 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 SLCO6A1Q86UG4 719 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 OR7A2PQ8NGA2 310 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 SLC22A17Q8WUG5 538 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 NDRG1Q92597 394 aaKnown RBP15.7■□□□□ 0.1
HMGA1-202ENST00000347617 PHF21BQ96EK2 531 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 LRCH3Q96II8 777 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 TXNDC15Q96J42 360 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 C3orf30Q96M34 536 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 FICDQ9BVA6 458 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 UGT2B28Q9BY64 529 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 LRRC3Q9BY71 257 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 ZIM2Q9NZV7 527 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 DNAJC15Q9Y5T4 150 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 GPR45Q9Y5Y3 372 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 SYNJ2BP-COX16A0A087WUM0 186 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 CARNS1A5YM72 827 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 FAM72CH0Y354 149 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 H7C4K7 107 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 M0R3G1 203 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 KCNH1O95259 989 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 CD40LGP29965 261 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 GRIK1P39086 918 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 CXCR3P49682 368 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 ECT2LQ008S8 904 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 CHRNB3Q05901 458 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 AQP6Q13520 282 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 POLD3Q15054 466 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-202ENST00000347617 VARS2Q5ST30 1063 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms