RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 NAPRTQ6XQN6 538 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 TIFABQ6ZNK6 161 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 ZNF547Q8IVP9 402 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 GIMAP7Q8NHV1 300 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 FAM45AQ8TCE6 357 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 ISL2Q96A47 359 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 PGM2Q96G03 612 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 TM9SF3Q9HD45 589 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 MRPL40Q9NQ50 206 aaKnown RBP18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 AASDHPPTQ9NRN7 309 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 GPR27Q9NS67 375 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 GNPTGQ9UJJ9 305 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 CORO1CQ9ULV4 474 aaPredicted RBP18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 TP53BP1Q12888 1972 aaPredicted RBP18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 A6NNZ2 444 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 CFAP99D6REC4 459 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 CACNB4O00305 520 aaPredicted RBP18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 PHGDHO43175 533 aaKnown RBP18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 VEGFDO43915 354 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 DNAJC6O75061 913 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 TRIM16O95361 564 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 RALBP11234 206 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 KRT15P19012 456 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 ITPKAP23677 461 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 LGSNQ5TDP6 509 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 CRTC3Q6UUV7 619 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 TMEM207Q6UWW9 146 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 SH2D5Q6ZV89 423 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 TAOK1Q7L7X3 1001 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 CROCCP2Q86T23 111 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 TRABD2AQ86V40 505 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 RGL4Q8IZJ4 473 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 HEXDCQ8WVB3 486 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 OR1E3Q8WZA6 343 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 MTBPQ96DY7 904 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 GPR21Q99679 349 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 CCDC68Q9H2F9 335 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 FGF22Q9HCT0 170 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 SNX15Q9NRS6 342 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 SLC17A4Q9Y2C5 497 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 FANCMQ8IYD8 2048 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 ATXN2Q99700 1313 aaKnown RBP18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 SDK1Q7Z5N4 2213 aa18.73■□□□□ 0.59
CHMP4A-201ENST00000347519 GOLGA8RI6L899 631 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 NUAK1O60285 661 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 AP2A2O94973 939 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 WISP3O95389 354 aaPredicted RBP18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 THEGLP0DJG4 465 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 HOXD11P31277 338 aaPredicted RBP18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 RABIFP47224 123 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 DHPSP49366 369 aaPredicted RBP18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 CLCN7P51798 805 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 YPEL5P62699 121 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 POU4F1Q01851 419 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 ZKSCAN8Q15776 578 aaPredicted RBP18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 ENPP7Q6UWV6 458 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 XKR5Q6UX68 686 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 EXOC3L1Q86VI1 746 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 SIDT2Q8NBJ9 832 aaKnown RBP18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 TLCD1Q96CP7 247 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 PRRX2Q99811 253 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 TM7SF3Q9NS93 570 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 NOVA2Q9UNW9 492 aaKnown RBP18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 COMMD10Q9Y6G5 202 aa18.72■□□□□ 0.59
CHMP4A-201ENST00000347519 CHUKO15111 745 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 SCAMP1O15126 338 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 OPA1O60313 960 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 TOP3BO95985 862 aaKnown RBP18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 MT-ND3P03897 115 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 OR56A5P0C7T3 313 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 CHRM3P20309 590 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 CCR7P32248 378 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 PRLHRP49683 370 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 SERPINB8P50452 374 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 RACK1P63244 317 aaKnown RBP18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 IRF9Q00978 393 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 GTF2H3Q13889 308 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 PLA2G4EQ3MJ16 856 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 BCL7AQ4VC05 210 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 AGBL2Q5U5Z8 902 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 CEP68Q76N32 757 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 C11orf96Q7Z7L8 435 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 C4orf33Q8N1A6 199 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 KLHDC7BQ96G42 594 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 PDXPQ96GD0 296 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 SCARF2Q96GP6 870 aaPredicted RBP18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 WDR92Q96MX6 357 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 ZCCHC2Q9C0B9 1178 aaKnown RBP18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 ACBD3Q9H3P7 528 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 SARS2Q9NP81 518 aaKnown RBP18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 GULP1Q9UBP9 304 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 SLC23A2Q9UGH3 650 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 PLEKHM1Q9Y4G2 1056 aa18.71■□□□□ 0.59
CHMP4A-201ENST00000347519 GOLGA6L10A6NI86 522 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 H3BQF6 201 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 C2P06681 752 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 SLC35E2BP0CK96 405 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 PYGBP11216 843 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 STMN1P16949 149 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 CD38P28907 300 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms