RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 A0A0G2JNG1 304 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 K7ENP7 123 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 KIR2DS3K7RE56 304 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 NVLO15381 856 aaKnown RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 STX7O15400 261 aaKnown RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 PPFIA2O75334 1257 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 FGF3P11487 239 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 BRAFP15056 766 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 LPOP22079 712 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 UCNP55089 124 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 UBE2IP63279 158 aaKnown RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 CCZ1BP86790 482 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 CCZ1P86791 482 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 XIAPP98170 497 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 VAC14Q08AM6 782 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 KIR2DS5Q14953 304 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 SEPT7Q16181 437 aaKnown RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 CLPPQ16740 277 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 PARP6Q2NL67 630 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 GPRC6AQ5T6X5 926 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 MEI1Q5TIA1 1274 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 KIAA1614Q5VZ46 1190 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 ZDHHC20Q5W0Z9 365 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 INO80CQ6PI98 192 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 ARHGEF18Q6ZSZ5 1173 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 TRAPPC5Q8IUR0 188 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 TAB3Q8N5C8 712 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 CCDC112Q8NEF3 446 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 BRSK1Q8TDC3 778 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 NAT14Q8WUY8 206 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 TTC9Q92623 222 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 CCDC97Q96F63 343 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 SLC38A3Q99624 504 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 CMKLR1Q99788 373 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 ARNT2Q9HBZ2 717 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 RYDENQ9NUL5 291 aaKnown RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 SMOXQ9NWM0 555 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 ZNF624Q9P2J8 865 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-202ENST00000344726 CPNE7Q9UBL6 633 aa14.2□□□□□ -0.14
HMGN3-202ENST00000344726 C2orf81A6NN90 581 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 PRAMEF1O95521 474 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 WT1P19544 449 aaPredicted RBP14.19□□□□□ -0.14
HMGN3-202ENST00000344726 RPL10P27635 214 aaKnown RBP14.19□□□□□ -0.14
HMGN3-202ENST00000344726 SLC19A1P41440 591 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 ZNF140P52738 457 aaPredicted RBP14.19□□□□□ -0.14
HMGN3-202ENST00000344726 GPLD1P80108 840 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 ITGA9Q13797 1035 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 OASLQ15646 514 aaKnown RBP14.19□□□□□ -0.14
HMGN3-202ENST00000344726 LDLRAP1Q5SW96 308 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 SEL1L2Q5TEA6 688 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 ZNF662Q6ZS27 426 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 SLC9B2Q86UD5 537 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 SLC13A5Q86YT5 568 aaPredicted RBP14.19□□□□□ -0.14
HMGN3-202ENST00000344726 OR4D9Q8NGE8 314 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 ZNF398Q8TD17 642 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 TMEM159Q96B96 161 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 RTP4Q96DX8 246 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 TBC1D10AQ9BXI6 508 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 LZTFL1Q9NQ48 299 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 PIH1D1Q9NWS0 290 aaKnown RBP14.19□□□□□ -0.14
HMGN3-202ENST00000344726 BOLA1Q9Y3E2 137 aa14.19□□□□□ -0.14
HMGN3-202ENST00000344726 OR2AG2A6NM03 316 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 OR5K4A6NMS3 321 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 CCL22O00626 93 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 HGSO14964 777 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 ZW10O43264 779 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 LDB2O43679 373 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 LIASO43766 372 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 ZNF189O75820 626 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 SRP72O76094 671 aaKnown RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 LIPCP11150 499 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 SLC2A4P14672 509 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 TPH1P17752 444 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 XRCC1P18887 633 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 DRG2P55039 364 aaKnown RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 TMPRSS15P98073 1019 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 GTF2H3Q13889 308 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 SIX1Q15475 284 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 TMEM71Q6P5X7 295 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 TMEM220Q6QAJ8 160 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 ABRAXAS1Q6UWZ7 409 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 FAM83HQ6ZRV2 1179 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 PRUNE1Q86TP1 453 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 VASH2Q86V25 355 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 DTX1Q86Y01 620 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 OR10G6Q8NH81 332 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 C1orf54Q8WWF1 131 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 TTC25Q96NG3 672 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 PPP1R2P1Q96PQ5 205 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 CCNL2Q96S94 520 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 SEMA4CQ9C0C4 833 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 OCIAD1Q9NX40 245 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 PDP2Q9P2J9 529 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 WDR37Q9Y2I8 494 aa14.18□□□□□ -0.14
HMGN3-202ENST00000344726 GCN1Q92616 2671 aaKnown RBP14.18□□□□□ -0.14
HMGN3-202ENST00000344726 OR52A4PA6NMU1 304 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 AGAP14A8MT82 685 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 PDZK1P1A8MUH7 402 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms