RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 LOC100130705A0A1B0GUX0 176 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 hCG_2039718K7EN88 272 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 K7EPI3 171 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 ALDH1A2O94788 518 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 PIRTP0C851 137 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 C7P10643 843 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 TAS2R39P59534 338 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 SCRN3Q0VDG4 424 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 PCLAFQ15004 111 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 PCBP1Q15365 356 aaKnown RBP eCLIP17.9■□□□□ 0.467e-12■■■■■ 38.2
SMC4-201ENST00000344722 EEF1DP3Q658K8 133 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 ARMC6Q6NXE6 501 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 PLPPR4Q7Z2D5 763 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 KIAA0319LQ8IZA0 1049 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 UBE2J2Q8N2K1 259 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 TMPRSS4Q9NRS4 437 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 ERVK-11Q9UQG0 969 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 SPATA31A6Q5VVP1 1343 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 OR5F1O95221 314 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 COL6A1P12109 1028 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 AQP1P29972 269 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 GRM5P41594 1212 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 RFTN1Q14699 578 aaPredicted RBP17.9■□□□□ 0.46
SMC4-201ENST00000344722 PPCDCQ96CD2 204 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 MNTQ99583 582 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 ZDHHC2Q9UIJ5 367 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 CCNB2O95067 398 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 CNTN2Q02246 1040 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 WSCD2Q2TBF2 565 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 GCNT6Q5T4J0 391 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 USP30Q70CQ3 517 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 GPR156Q8NFN8 814 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 CMASQ8NFW8 434 aaPredicted RBP17.89■□□□□ 0.45
SMC4-201ENST00000344722 SLC7A5P2Q9GIP4 190 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 ADAMTS10Q9H324 1103 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 CNTN3Q9P232 1028 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 RAB23Q9ULC3 237 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 PCDHB1Q9Y5F3 818 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 SPATA31A5Q5VU36 1347 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 SPATA31A7Q8IWB4 1347 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 IGLV3-22A0A075B6J6 115 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 CXCR2P25025 360 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 HTR7P34969 479 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 MAPK12P53778 367 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 MTAPQ13126 283 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 SNAPC1Q16533 368 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 ZNF772Q68DY9 489 aaPredicted RBP17.89■□□□□ 0.45
SMC4-201ENST00000344722 ESRP1Q6NXG1 681 aaKnown RBP17.89■□□□□ 0.45
SMC4-201ENST00000344722 TOP6BLQ8N6T0 577 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 GLIS1Q8NBF1 620 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 DENND1AQ8TEH3 1009 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 GATA6Q92908 595 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 OR2B2Q9GZK3 357 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 IPPKQ9H8X2 491 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 BCL9LQ86UU0 1499 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 H0YAE9 185 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 B4GALT5O43286 388 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 ASMTP46597 345 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 ERVK-8P63133 956 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 CD83Q01151 205 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 CELF3Q5SZQ8 465 aaKnown RBP17.89■□□□□ 0.45
SMC4-201ENST00000344722 ZC3H3Q8IXZ2 948 aaKnown RBP17.89■□□□□ 0.45
SMC4-201ENST00000344722 C11orf65Q8NCR3 313 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 CSGALNACT1Q8TDX6 532 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 TCF25Q9BQ70 676 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 RACGAP1Q9H0H5 632 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 PRAMEF1O95521 474 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 POMCP01189 267 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 MAPK8P45983 427 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 ZNF45Q02386 682 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 SLC39A12Q504Y0 691 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 ARHGAP15Q53QZ3 475 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 ACAT2Q9BWD1 397 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 DTLQ9NZJ0 730 aa17.89■□□□□ 0.45
SMC4-201ENST00000344722 AP3D1O14617 1153 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 CCNYL3P0C7X3 344 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 CD72P21854 359 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 ICAM3P32942 547 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 HERVK_113P63132 956 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 SYT16Q17RD7 645 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 ZNF181Q2M3W8 571 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 TSTD2Q5T7W7 516 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 APOLD1Q96LR9 279 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 FAIM2Q9BWQ8 316 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 ERVK-6Q9BXR3 956 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 KCNN2Q9H2S1 579 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 EIF3KQ9UBQ5 218 aaKnown RBP17.88■□□□□ 0.45
SMC4-201ENST00000344722 INMTO95050 263 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 IFNW1P05000 195 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 POLR2LP62875 67 aaKnown RBP17.88■□□□□ 0.45
SMC4-201ENST00000344722 GPAT3Q53EU6 434 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 KIAA0930Q6ICG6 404 aaPredicted RBP17.88■□□□□ 0.45
SMC4-201ENST00000344722 RHBDF2Q6PJF5 856 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 HDAC2Q92769 488 aaKnown RBP17.88■□□□□ 0.45
SMC4-201ENST00000344722 ADAM7Q9H2U9 754 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 MMP27Q9H306 513 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 AGO3Q9H9G7 860 aaKnown RBP17.88■□□□□ 0.45
SMC4-201ENST00000344722 AASSQ9UDR5 926 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 CKMP06732 381 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 PLEKHG4Q58EX7 1191 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms