RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.75■■□□□ 1.07
CACNB1-201ENST00000344140 TRIM67Q6ZTA4 783 aa21.75■■□□□ 1.07
CACNB1-201ENST00000344140 HDDC3Q8N4P3 179 aa21.75■■□□□ 1.07
CACNB1-201ENST00000344140 PIWIL2Q8TC59 973 aaKnown RBP21.75■■□□□ 1.07
CACNB1-201ENST00000344140 LKAAEAR1Q8TD35 194 aa21.75■■□□□ 1.07
CACNB1-201ENST00000344140 RNF112Q9ULX5 631 aa21.75■■□□□ 1.07
CACNB1-201ENST00000344140 COQ6Q9Y2Z9 468 aa21.75■■□□□ 1.07
CACNB1-201ENST00000344140 PLXNB3Q9ULL4 1909 aa21.74■■□□□ 1.07
CACNB1-201ENST00000344140 BTN3A1O00481 513 aa21.74■■□□□ 1.07
CACNB1-201ENST00000344140 NPHS1O60500 1241 aa21.74■■□□□ 1.07
CACNB1-201ENST00000344140 SRFP11831 508 aa21.74■■□□□ 1.07
CACNB1-201ENST00000344140 ITGB6P18564 788 aa21.74■■□□□ 1.07
CACNB1-201ENST00000344140 TDGQ13569 410 aa21.74■■□□□ 1.07
CACNB1-201ENST00000344140 HSF5Q4G112 596 aaPredicted RBP21.74■■□□□ 1.07
CACNB1-201ENST00000344140 CFAP157Q5JU67 520 aa21.74■■□□□ 1.07
CACNB1-201ENST00000344140 WDR75Q8IWA0 830 aaKnown RBP21.74■■□□□ 1.07
CACNB1-201ENST00000344140 DCTN4Q9UJW0 460 aa21.74■■□□□ 1.07
CACNB1-201ENST00000344140 DNAJC16Q9Y2G8 782 aa21.74■■□□□ 1.07
CACNB1-201ENST00000344140 NEMP2A6NFY4 417 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 CBSLP0DN79 551 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 CBSP35520 551 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 TSNQ15631 228 aaKnown RBP21.73■■□□□ 1.07
CACNB1-201ENST00000344140 CACUL1Q86Y37 369 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 PHYKPLQ8IUZ5 450 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 CCNYL1Q8N7R7 359 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 RFWD2Q8NHY2 731 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 CNDP1Q96KN2 507 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 KCNK4Q9NYG8 393 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 TMCO1Q9UM00 188 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 SCML1Q9UN30 329 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 A0A1W2PQF6 199 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 EIF3FO00303 357 aaPredicted RBP21.73■■□□□ 1.07
CACNB1-201ENST00000344140 CDC7O00311 574 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 NARSO43776 548 aaKnown RBP21.73■■□□□ 1.07
CACNB1-201ENST00000344140 ARRB2P32121 409 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 RAB44Q7Z6P3 723 aaPredicted RBP21.73■■□□□ 1.07
CACNB1-201ENST00000344140 MYO1HQ8N1T3 1032 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 NAT14Q8WUY8 206 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 FAM3CQ92520 227 aa21.73■■□□□ 1.07
CACNB1-201ENST00000344140 FUBP1Q96AE4 644 aaKnown RBP21.73■■□□□ 1.07
CACNB1-201ENST00000344140 MKRN2Q9H000 416 aaKnown RBP21.73■■□□□ 1.07
CACNB1-201ENST00000344140 ILKAPQ9H0C8 392 aaPredicted RBP21.73■■□□□ 1.07
CACNB1-201ENST00000344140 UNC80Q8N2C7 3258 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 A0A0G2JND7 137 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 A0A1W2PP55 124 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 NPEPPSL1A6NEC2 478 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 KPNA5O15131 536 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 RNASEH2AO75792 299 aaKnown RBP21.72■■□□□ 1.07
CACNB1-201ENST00000344140 DNTTP04053 509 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 IMPDH1P20839 514 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 ARFIP2P53365 341 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 TAS2R38P59533 333 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 SLC44A4Q53GD3 710 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 ADAMTSL2Q86TH1 951 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 TMPRSS6Q8IU80 811 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 PHF21BQ96EK2 531 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 L3HYPDHQ96EM0 354 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 CYP4F12Q9HCS2 524 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 PRUNE2Q8WUY3 3088 aa21.72■■□□□ 1.07
CACNB1-201ENST00000344140 CCT8L1PA6NM43 557 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 KITP10721 976 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 ENO3P13929 434 aaPredicted RBP21.71■■□□□ 1.07
CACNB1-201ENST00000344140 MTHFD2P13995 350 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 GPR1P46091 355 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 ZBTB16Q05516 673 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 EOGTQ5NDL2 527 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 IER5LQ5T953 404 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 RAET1GQ6H3X3 334 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 DET1Q7L5Y6 550 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 TRPM8Q7Z2W7 1104 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 EXT2Q93063 718 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 FAM131CQ96AQ9 280 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 TMEM237Q96Q45 408 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 ZCCHC2Q9C0B9 1178 aaKnown RBP21.71■■□□□ 1.07
CACNB1-201ENST00000344140 KCNK13Q9HB14 408 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 FBXL12Q9NXK8 326 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 MARCOQ9UEW3 520 aaPredicted RBP21.71■■□□□ 1.07
CACNB1-201ENST00000344140 IKZF3Q9UKT9 509 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 RAP2CQ9Y3L5 183 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 ATXN2Q99700 1313 aaKnown RBP21.71■■□□□ 1.07
CACNB1-201ENST00000344140 SUPT3HB4E1H0 165 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 UBXN8O00124 270 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 MTX2O75431 263 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 SUPT3HO75486 399 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 TM7SF2O76062 418 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 PCDH8O95206 1070 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 SOD1P00441 154 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 FTH1P02794 183 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 C7P10643 843 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 GFAPP14136 432 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 HK2P52789 917 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 HERVK_113P63132 956 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 PRKAA1Q13131 559 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 ARL13AQ5H913 290 aaPredicted RBP21.71■■□□□ 1.07
CACNB1-201ENST00000344140 YTHDF3Q7Z739 585 aaKnown RBP21.71■■□□□ 1.07
CACNB1-201ENST00000344140 GPSM1Q86YR5 675 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 GANCQ8TET4 914 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 RMDN2Q96LZ7 410 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 TRMOQ9BU70 441 aa21.71■■□□□ 1.07
CACNB1-201ENST00000344140 TMEM120AQ9BXJ8 343 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms