RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 ZFP36L2P47974 494 aaKnown RBP19.13■□□□□ 0.65
COL9A3-201ENST00000343916 ADARP55265 1226 aaKnown RBP19.13■□□□□ 0.65
COL9A3-201ENST00000343916 MYBPC1Q00872 1141 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 RABL3Q5HYI8 236 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 PAGE3Q5JUK9 113 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 ZNF783Q6ZMS7 281 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 FRA10AC1Q70Z53 315 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 IFNEQ86WN2 208 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 MINDY1Q8N5J2 469 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 OR2T34Q8NGX1 318 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 OR2T3Q8NH03 318 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 RIN3Q8TB24 985 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 LKAAEAR1Q8TD35 194 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 DDI1Q8WTU0 396 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 RPL10LQ96L21 214 aaKnown RBP19.13■□□□□ 0.65
COL9A3-201ENST00000343916 OCEL1Q9H607 264 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 MAGEE1Q9HCI5 957 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 AIG1Q9NVV5 245 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 INSL5Q9Y5Q6 135 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 COMMD10Q9Y6G5 202 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 C1orf232A0A0U1RR37 186 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 GOLGA8CPA6NN73 597 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 GAPDHSO14556 408 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-201ENST00000343916 AP1G1O43747 822 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 VPS4BO75351 444 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 GUCA1CO95843 209 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 CKMT2P17540 419 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 CYP4F8P98187 520 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 TPGS1Q6ZTW0 290 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 SERPINA9Q86WD7 417 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 TNKS2Q9H2K2 1166 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 VCX3AQ9NNX9 186 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 HSFX1Q9UBD0 423 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 DHRS7Q9Y394 339 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 PRSS21Q9Y6M0 314 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 AKAP10O43572 662 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 CLDN7O95471 211 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 STAMBPO95630 424 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 UGT1A6P19224 532 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 CD9P21926 228 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 UGT1A1P22309 533 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 UGT1A4P22310 534 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 UGT1A3P35503 534 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 UGT1A5P35504 534 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 HTR6P50406 440 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 KCNK10P57789 538 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 RCAN2Q14206 197 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 FUT11Q495W5 492 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 PTRHD1Q6GMV3 140 aaKnown RBP19.12■□□□□ 0.65
COL9A3-201ENST00000343916 SBSNQ6UWP8 590 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 EGFL6Q8IUX8 553 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 DCAF4L2Q8NA75 395 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 FNDC5Q8NAU1 212 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 NUSAP1Q9BXS6 441 aaKnown RBP19.12■□□□□ 0.65
COL9A3-201ENST00000343916 ZFYVE1Q9HBF4 777 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 TRIM17Q9Y577 477 aa19.12■□□□□ 0.65
COL9A3-201ENST00000343916 KATNA1O75449 491 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 PABPC4LP0CB38 370 aaKnown RBP19.11■□□□□ 0.65
COL9A3-201ENST00000343916 NFYCQ13952 458 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 IKBKEQ14164 716 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 Q6ZNB5 142 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 Q6ZSR9 355 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 STK40Q8N2I9 435 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 PIP4K2CQ8TBX8 421 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 NUDT8Q8WV74 236 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 C17orf80Q9BSJ5 609 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 ASB8Q9H765 288 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 IL21Q9HBE4 155 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 DNMT3BQ9UBC3 853 aaKnown RBP19.11■□□□□ 0.65
COL9A3-201ENST00000343916 LZTS1Q9Y250 596 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 PLXNA4Q9HCM2 1894 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 COL4A6Q14031 1691 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 A0A1W2PP18 115 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 TPST1O60507 370 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 FKTNO75072 461 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 CAPN1P07384 714 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 CNPP09543 421 aaKnown RBP19.11■□□□□ 0.65
COL9A3-201ENST00000343916 IL12AP29459 219 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 EPHB3P54753 998 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 TIGD2Q4W5G0 525 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 C6orf136Q5SQH8 315 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 SPATA19Q7Z5L4 167 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 SLC39A11Q8N1S5 342 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 MYO1HQ8N1T3 1032 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 VWCEQ96DN2 955 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 PRPF18Q99633 342 aaKnown RBP19.11■□□□□ 0.65
COL9A3-201ENST00000343916 CLPBQ9H078 707 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 NSUN3Q9H649 340 aaKnown RBP19.11■□□□□ 0.65
COL9A3-201ENST00000343916 GID8Q9NWU2 228 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 SLC4A7Q9Y6M7 1214 aa19.11■□□□□ 0.65
COL9A3-201ENST00000343916 TANC1Q9C0D5 1861 aa19.1■□□□□ 0.65
COL9A3-201ENST00000343916 FAM149AA5PLN7 773 aa19.1■□□□□ 0.65
COL9A3-201ENST00000343916 SLC22A3O75751 556 aa19.1■□□□□ 0.65
COL9A3-201ENST00000343916 TRIM16O95361 564 aa19.1■□□□□ 0.65
COL9A3-201ENST00000343916 URODP06132 367 aa19.1■□□□□ 0.65
COL9A3-201ENST00000343916 MTHFD1P11586 935 aaKnown RBP19.1■□□□□ 0.65
COL9A3-201ENST00000343916 ATP6V1B1P15313 513 aa19.1■□□□□ 0.65
COL9A3-201ENST00000343916 CA8P35219 290 aa19.1■□□□□ 0.65
COL9A3-201ENST00000343916 TLE2Q04725 743 aa19.1■□□□□ 0.65
COL9A3-201ENST00000343916 RAB33AQ14088 237 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms