RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 NKIRAS1Q9NYS0 192 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 ANKMY1Q9P2S6 941 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 LGALS13Q9UHV8 139 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 VPS51Q9UID3 782 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 NEU2Q9Y3R4 380 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 MUC6Q6W4X9 2439 aa7.27□□□□□ -1.24
ZNF540-202ENST00000343599 C2orf78A6NCI8 922 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 TRABD2BA6NFA1 517 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 FZD6O60353 706 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 SPAG7O75391 227 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 THRAP10827 490 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 BRAFP15056 766 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 PRKCIP41743 596 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 ALDH3B2P48448 385 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 HCAR3P49019 387 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 PPM1FP49593 454 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 SLC18A1P54219 525 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 ADPRHP54922 357 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 YWHAGP61981 247 aaKnown RBP eCLIP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 GPLD1P80108 840 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 EFTUD2Q15029 972 aaKnown RBP eCLIP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 TLR1Q15399 786 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 RGS21Q2M5E4 152 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 WASH2PQ6VEQ5 465 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 MTDHQ86UE4 582 aaKnown RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 C12orf40Q86WS4 652 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 NRSN1Q8IZ57 195 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 C7orf57Q8NEG2 295 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 SLC35F5Q8WV83 523 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 SYN2Q92777 582 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 CRELD1Q96HD1 420 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 FCRL2Q96LA5 508 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 FAM129BQ96TA1 746 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 CIB1Q99828 191 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 TRIM51Q9BSJ1 452 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 CXCL16Q9H2A7 254 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 WASH6PQ9NQA3 447 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 MOCS1Q9NZB8 636 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 GRHL1Q9NZI5 618 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 HMGXB4Q9UGU5 601 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 H3BNX3 289 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 TLX3O43711 291 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 SCO2O43819 266 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 SIN3BO75182 1162 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 IL32P24001 234 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 CXCR2P25025 360 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 PRDX6P30041 224 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 L1CAMP32004 1257 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 PGM1P36871 562 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 DNA2P51530 1060 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 PMS1P54277 932 aaKnown RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 DAOAP59103 153 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 STK4Q13043 487 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 DHX34Q14147 1143 aaKnown RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 ISXQ2M1V0 245 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 TTI2Q6NXR4 508 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 TRIM72Q6ZMU5 477 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 CYP4V2Q6ZWL3 525 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 TRMT10CQ7L0Y3 403 aaKnown RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 SNX32Q86XE0 403 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 NTNG2Q96CW9 530 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 GIMAP5Q96F15 307 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 HES6Q96HZ4 224 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 FAR2Q96K12 515 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 ZBTB45Q96K62 511 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 FBRSL1Q9HCM7 1045 aaKnown RBP7.27□□□□□ -1.25
ZNF540-202ENST00000343599 S100A14Q9HCY8 104 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 KCNK9Q9NPC2 374 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 PLA2G4CQ9UP65 541 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 ERGIC3Q9Y282 383 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 PCDHB4Q9Y5E5 795 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 RAD54BQ9Y620 910 aa7.27□□□□□ -1.25
ZNF540-202ENST00000343599 TRIM49BA6NDI0 452 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 LRRC53A6NM62 1247 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 SYCE1LA8MT33 242 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 NUDT21O43809 227 aaKnown RBP7.26□□□□□ -1.25
ZNF540-202ENST00000343599 USP1O94782 785 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 ALX3O95076 343 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 ZNF23P17027 643 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 POLR2CP19387 275 aaPredicted RBP7.26□□□□□ -1.25
ZNF540-202ENST00000343599 CAPN3P20807 821 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 CORO1AP31146 461 aaKnown RBP7.26□□□□□ -1.25
ZNF540-202ENST00000343599 PTGER3P43115 390 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 ST8SIA6P61647 398 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 PPP2R2BQ00005 443 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 MYBPC1Q00872 1141 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 LINC00303Q3SY05 128 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 STXBP5Q5T5C0 1151 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 KRT39Q6A163 491 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 THNSL2Q86YJ6 484 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 BBS7Q8IWZ6 715 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 CHCHD4Q8N4Q1 142 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 OR6B3Q8NGW1 331 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 TTC1Q99614 292 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 BBS2Q9BXC9 721 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 SLC12A9Q9BXP2 914 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 MARCH7Q9H992 704 aa7.26□□□□□ -1.25
ZNF540-202ENST00000343599 XAB2Q9HCS7 855 aaKnown RBP7.26□□□□□ -1.25
ZNF540-202ENST00000343599 POU2F3Q9UKI9 436 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms