RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ICAM1P05362 532 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 LBPP18428 481 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 CYP2C18P33260 490 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 SRP54P61011 504 aaKnown RBP18.34■□□□□ 0.53
SMPD1-201ENST00000342245 POU4F1Q01851 419 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 FPGSQ05932 587 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 TRIP4Q15650 581 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-201ENST00000342245 GPAT3Q53EU6 434 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 RABL3Q5HYI8 236 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 PIK3R6Q5UE93 754 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 CYHR1Q6ZMK1 362 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 GALNT7Q86SF2 657 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 NT5DC4Q86YG4 428 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 APPL2Q8NEU8 664 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 C17orf62Q9BQA9 187 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 C1QTNF7Q9BXJ2 289 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 FAM124BQ9H5Z6 455 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-201ENST00000342245 LIN7BQ9HAP6 207 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 TNFRSF12AQ9NP84 129 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 TNFRSF10DQ9UBN6 386 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 LRRC37AA6NMS7 1700 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 OR2A25A4D2G3 310 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 GNPDA1P46926 289 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 RBM20Q5T481 1227 aaKnown RBP18.34■□□□□ 0.53
SMPD1-201ENST00000342245 JADE1Q6IE81 842 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 LCLAT1Q6UWP7 414 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 CREB3L2Q70SY1 520 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 HDDC2Q7Z4H3 204 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 EID3Q8N140 333 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 PAF1Q8N7H5 531 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 LILRB1Q8NHL6 650 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-201ENST00000342245 SLC7A6Q92536 515 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 ELOVL4Q9GZR5 314 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 MIR1-1HGQ9H1L0 117 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 GSTO2Q9H4Y5 243 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 ZNF556Q9HAH1 456 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 POLR3BQ9NW08 1133 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-201ENST00000342245 B3GNT2Q9NY97 397 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 IL20Q9NYY1 176 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 KLHL8Q9P2G9 620 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-201ENST00000342245 USP3Q9Y6I4 520 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 WDR81Q562E7 1941 aa18.34■□□□□ 0.53
SMPD1-201ENST00000342245 ATP6AP2A0A1C7CYW4 349 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 OGTO15294 1046 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 XPNPEP2O43895 674 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 FGF4P08620 206 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 MAGEA11P43364 429 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 TMEM132AQ24JP5 1023 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 LRRC26Q2I0M4 334 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 NXNL2Q5VZ03 156 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 SPATA19Q7Z5L4 167 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 OR5K1Q8NHB7 308 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 UBA3Q8TBC4 463 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 POP5Q969H6 163 aaKnown RBP18.33■□□□□ 0.53
SMPD1-201ENST00000342245 NCLNQ969V3 563 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 L3HYPDHQ96EM0 354 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 MASTLQ96GX5 879 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 METTL2AQ96IZ6 378 aaKnown RBP18.33■□□□□ 0.53
SMPD1-201ENST00000342245 RWDD3Q9Y3V2 267 aa18.33■□□□□ 0.53
SMPD1-201ENST00000342245 MEIOCA2RUB1 952 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 ATP6AP2O75787 350 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 GOT2P00505 430 aaKnown RBP18.33■□□□□ 0.52
SMPD1-201ENST00000342245 F7P08709 466 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-201ENST00000342245 GLULP15104 373 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 TIE1P35590 1138 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 MLLT3P42568 568 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-201ENST00000342245 MASP1P48740 699 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 SEMA3BQ13214 749 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 BCL7AQ4VC05 210 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 SEZ6Q53EL9 994 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 XKR3Q5GH77 459 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 TIGD3Q6B0B8 471 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 SH3BP5LQ7L8J4 393 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 CEP97Q8IW35 865 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.33■□□□□ 0.52
SMPD1-201ENST00000342245 ADHFE1Q8IWW8 467 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 TCTE3Q8IZS6 198 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 ST13P5Q8NFI4 369 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-201ENST00000342245 LHFPL5Q8TAF8 219 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 CENPIQ92674 756 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-201ENST00000342245 HEXIM2Q96MH2 286 aaKnown RBP18.33■□□□□ 0.52
SMPD1-201ENST00000342245 MRIQ9BWK5 157 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 STOML2Q9UJZ1 356 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 V9GYQ6 96 aa18.33■□□□□ 0.52
SMPD1-201ENST00000342245 GNGT2O14610 69 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 STX7O15400 261 aaKnown RBP18.32■□□□□ 0.52
SMPD1-201ENST00000342245 ONECUT3O60422 494 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-201ENST00000342245 CST1P01037 141 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 MT-ND2P03891 347 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 PRKACAP17612 351 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 TNFSF9P41273 254 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 PPP3CCP48454 512 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 MLLT6P55198 1093 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-201ENST00000342245 B2MP61769 119 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 PRKCEQ02156 737 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 EN1Q05925 392 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-201ENST00000342245 KEAP1Q14145 624 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 RCAN2Q14206 197 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 PGM5Q15124 567 aa18.32■□□□□ 0.52
SMPD1-201ENST00000342245 KCTD11Q693B1 232 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms