RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PRPSAP2O60256 369 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 CPNE3O75131 537 aaKnown RBP16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 MTX2O75431 263 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 JCHAINP01591 159 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 VAV2P52735 878 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 CDH6P55285 790 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 PDE1BQ01064 536 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 ACY1Q03154 408 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 SMTNL2Q2TAL5 461 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 KHDC1Q4VXA5 237 aaKnown RBP16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 TMCO3Q6UWJ1 677 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 POLNQ7Z5Q5 900 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 UBXN4Q92575 508 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 ZNF501Q96CX3 271 aaPredicted RBP16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 LYSMD1Q96S90 227 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 TRIM39Q9HCM9 518 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 B3GNT3Q9Y2A9 372 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 DOCK10Q96BY6 2186 aa16.03■□□□□ 0.16
NECTIN1-202ENST00000340882 TMEM191CA6NGB0 347 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 MASP2O00187 686 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 LRRTM2O43300 516 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 SLC25A14O95258 325 aaPredicted RBP16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 NIPAL4Q0D2K0 466 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 ELOAQ14241 798 aaKnown RBP16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 ALS2CLQ60I27 953 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 PLEKHA7Q6IQ23 1121 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 CYB5D1Q6P9G0 228 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 FBXO38Q6PIJ6 1188 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 ZC3H18Q86VM9 953 aaKnown RBP16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 TMEM126BQ8IUX1 230 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 PSTKQ8IV42 348 aaKnown RBP16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 RAVER1Q8IY67 606 aaKnown RBP16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 D2HGDHQ8N465 521 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 TTC30BQ8N4P2 665 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 GPR26Q8NDV2 337 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 ARRDC2Q8TBH0 407 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 LRRN4Q8WUT4 740 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 CXorf40BQ96DE9 158 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 PPM1MQ96MI6 270 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 CSPG4P5Q96PW8 444 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 ZWILCHQ9H900 591 aa16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 COPG1Q9Y678 874 aaKnown RBP16.02■□□□□ 0.16
NECTIN1-202ENST00000340882 TMCO5BA8MYB1 307 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 H3BRJ5 948 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 KMOO15229 486 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 ZG16O60844 167 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 MTA2O94776 668 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 LCA5LO95447 670 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 RAB40ALP0C0E4 278 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 DESP17661 470 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 ABRQ12979 859 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 NAA30Q147X3 362 aaPredicted RBP16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 SYCP1Q15431 976 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 ZRSR2Q15696 482 aaKnown RBP16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 DPYSL2Q16555 572 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 KYNUQ16719 465 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 QPCTQ16769 361 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 FAM182AQ5T1J6 154 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 TXNRD3NBQ6F5E7 133 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 ALG1LQ6GMV1 187 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 FAM198BQ6UWH4 519 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 MED25Q71SY5 747 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 C11orf96Q7Z7L8 435 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 LRRTM4Q86VH4 590 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 BPHLQ86WA6 291 aaPredicted RBP16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 DSELQ8IZU8 1212 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 TMEM102Q8N9M5 508 aaPredicted RBP16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 NSMCE1Q8WV22 266 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 UBE2Q2Q8WVN8 375 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 PCMTD1Q96MG8 357 aaPredicted RBP16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 SPATA16Q9BXB7 569 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 NLNQ9BYT8 704 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 POLR1EQ9GZS1 481 aaKnown RBP16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 PCDH9Q9HC56 1237 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 ZBTB20Q9HC78 741 aaPredicted RBP16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 KCND1Q9NSA2 647 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 PKD2L2Q9NZM6 624 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 C5AR2Q9P296 337 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 G3BP2Q9UN86 482 aaKnown RBP16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 MYO7BQ6PIF6 2116 aa16.01■□□□□ 0.15
NECTIN1-202ENST00000340882 CCDC168Q8NDH2 2452 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 MEN1O00255 615 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 RNF8O76064 485 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 FECHP22830 423 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 RORAP35398 523 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 TUBB4BP68371 445 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 TUBB2AQ13885 445 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 ANO6Q4KMQ2 910 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 ANKRD20A8PQ5CZ79 823 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 ZNF569Q5MCW4 686 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 VWA5B1Q5TIE3 1220 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 AGAP9Q5VTM2 703 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 WASH2PQ6VEQ5 465 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 CUZD1Q86UP6 607 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 HSPH1Q92598 858 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 ZNF653Q96CK0 615 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 TIMM29Q9BSF4 260 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 TUBB2BQ9BVA1 445 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 PARVAQ9NVD7 372 aa16■□□□□ 0.15
NECTIN1-202ENST00000340882 TMPRSS11EQ9UL52 423 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms