RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SLC7A2P52569 658 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 MTA1Q13330 715 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 TGFBIQ15582 683 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 C9orf50Q5SZB4 431 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 CRTC1Q6UUV9 634 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 CLYBLQ8N0X4 340 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 NRG4Q8WWG1 115 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 NAF1Q96HR8 494 aaKnown RBP10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 LRCH3Q96II8 777 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 COPS8Q99627 209 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 PFDN4Q9NQP4 134 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 INTS10Q9NVR2 710 aaKnown RBP10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 SLCO1B7G3V0H7 640 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 STAMBPO95630 424 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 CPOXP36551 454 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 VHLP40337 213 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 FRG1Q14331 258 aaKnown RBP10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 INO80DQ53TQ3 878 aaPredicted RBP10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 C16orf89Q6UX73 402 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 SYVN1Q86TM6 617 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 SPPL3Q8TCT6 385 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 MED8Q96G25 268 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 SPHK2Q9NRA0 654 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 MBD1Q9UIS9 605 aaPredicted RBP10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 MED16Q9Y2X0 877 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 ASB3Q9Y575 518 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 ANKRD36A6QL64 1941 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 LINC01553A4QN01 128 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 TBC1D3BA6NDS4 549 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 TRAFD1O14545 582 aaPredicted RBP10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 KERAO60938 352 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 EFCAB14O75071 495 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 MTHFD2P13995 350 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 LHCGRP22888 699 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 HMGCLP35914 325 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 PBX2P40425 430 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 HK3P52790 923 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 PSME3P61289 254 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 AAK1Q2M2I8 961 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 GPRIN3Q6ZVF9 776 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 RBFAQ8N0V3 343 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 ELMO1Q92556 727 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 ATOH8Q96SQ7 321 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 SERPINI1Q99574 410 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 SLC8A2Q9UPR5 921 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 TRIOO75962 3097 aa10.05□□□□□ -0.8
RBFOX1-202ENST00000340209 EFNA1P20827 205 aaPredicted RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 PEX2P28328 305 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 PTGER3P43115 390 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 LCP2Q13094 533 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 GPM6BQ13491 265 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 NUMA1Q14980 2115 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 SYTL3Q4VX76 610 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 ACBD5Q5T8D3 534 aaPredicted RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 Q6ZNB5 142 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 KIAA1191Q96A73 305 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 STN1Q9H668 368 aaKnown RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 IPPKQ9H8X2 491 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 EBF2Q9HAK2 575 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 ZBTB26Q9HCK0 441 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 GNPTGQ9UJJ9 305 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 E7ENX8 843 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 LMNAP02545 664 aaKnown RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 SLC2A4P14672 509 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 PREPP48147 710 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 RPL38P63173 70 aaKnown RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 CARD16Q5EG05 197 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 REP15Q6BDI9 236 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 FBXW8Q8N3Y1 598 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 FIBINQ8TAL6 211 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 UCMAQ8WVF2 138 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 KLK6Q92876 244 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 ACTR8Q9H981 624 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 RC3H2Q9HBD1 1191 aaKnown RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 SUN2Q9UH99 717 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 POLR3HQ9Y535 204 aaPredicted RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 OR51B4Q9Y5P0 310 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 CHD5Q8TDI0 1954 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 GREM1O60565 184 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 LRATO95237 230 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 ALDOCP09972 364 aaKnown RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 SLC6A11P48066 632 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 DGKGP49619 791 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 NEK2P51955 445 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 CRTC3Q6UUV7 619 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 HTR3DQ70Z44 454 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 NET1Q7Z628 596 aaPredicted RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 LMNTD2Q8IXW0 634 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 ZBTB2Q8N680 514 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 OR56A4Q8NGH8 313 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 ALG14Q96F25 216 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 LRGUKQ96M69 825 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 PLEKHG4BQ96PX9 1271 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 RIOK2Q9BVS4 552 aaKnown RBP10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 POLG2Q9UHN1 485 aa10.04□□□□□ -0.8
RBFOX1-202ENST00000340209 KIAA0355O15063 1070 aa10.03□□□□□ -0.8
RBFOX1-202ENST00000340209 FFAR2O15552 330 aa10.03□□□□□ -0.8
RBFOX1-202ENST00000340209 ESR1P03372 595 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms