RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 NAF1Q96HR8 494 aaKnown RBP10.96□□□□□ -0.65
LRP1-202ENST00000338962 LMLNQ96KR4 655 aa10.96□□□□□ -0.65
LRP1-202ENST00000338962 ZNF570Q96NI8 536 aa10.96□□□□□ -0.65
LRP1-202ENST00000338962 TUBGCP5Q96RT8 1024 aa10.96□□□□□ -0.65
LRP1-202ENST00000338962 P2RY12Q9H244 342 aa10.96□□□□□ -0.65
LRP1-202ENST00000338962 MID1IP1Q9NPA3 183 aa10.96□□□□□ -0.65
LRP1-202ENST00000338962 IL26Q9NPH9 171 aa10.96□□□□□ -0.65
LRP1-202ENST00000338962 HELZP42694 1942 aaKnown RBP10.96□□□□□ -0.66
LRP1-202ENST00000338962 GLYATL1P3A0A0U1RQE8 302 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 NCF1BA6NI72 391 aaPredicted RBP10.96□□□□□ -0.66
LRP1-202ENST00000338962 IQCF5A8MTL0 148 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 NCF1CA8MVU1 366 aaPredicted RBP10.96□□□□□ -0.66
LRP1-202ENST00000338962 A8MX80 341 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 UBDO15205 165 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 SNX2O60749 519 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 GPC4O75487 556 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 CDK14O94921 469 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 TSPAN12O95859 305 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 NCF1P14598 390 aaPredicted RBP10.96□□□□□ -0.66
LRP1-202ENST00000338962 GNAZP19086 355 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 PTDSS1P48651 473 aaKnown RBP10.96□□□□□ -0.66
LRP1-202ENST00000338962 SESN3P58005 492 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 SH3BP2P78314 561 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 LCP2Q13094 533 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 BLMHQ13867 455 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 MYLK3Q32MK0 819 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 GRAMD4Q6IC98 578 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 CAPRIN2Q6IMN6 1127 aaKnown RBP10.96□□□□□ -0.66
LRP1-202ENST00000338962 C16orf89Q6UX73 402 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 VITQ6UXI7 678 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 USP45Q70EL2 814 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.96□□□□□ -0.66
LRP1-202ENST00000338962 PELI3Q8N2H9 469 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 KCNV2Q8TDN2 545 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 CCDC124Q96CT7 223 aaKnown RBP10.96□□□□□ -0.66
LRP1-202ENST00000338962 ASIC4Q96FT7 647 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 RPP25Q9BUL9 199 aaKnown RBP10.96□□□□□ -0.66
LRP1-202ENST00000338962 PLA2G2FQ9BZM2 168 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 KCNK12Q9HB15 430 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 TBC1D14Q9P2M4 693 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 LIMD1Q9UGP4 676 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 GNPTGQ9UJJ9 305 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 IKZF3Q9UKT9 509 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 LRRC42Q9Y546 428 aa10.96□□□□□ -0.66
LRP1-202ENST00000338962 NPIPB15A6NHN6 443 aaPredicted RBP10.95□□□□□ -0.66
LRP1-202ENST00000338962 LRRC14BA6NHZ5 514 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 CCNT2O60583 730 aaKnown RBP10.95□□□□□ -0.66
LRP1-202ENST00000338962 PDE5AO76074 875 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 FGF4P08620 206 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 PABPC1P11940 636 aaKnown RBP10.95□□□□□ -0.66
LRP1-202ENST00000338962 TYRP14679 529 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 BPIP17213 487 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 PSMC3P17980 439 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 SPAM1P38567 509 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 CLCN7P51798 805 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 CCNHP51946 323 aaPredicted RBP10.95□□□□□ -0.66
LRP1-202ENST00000338962 NAA20P61599 178 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 MRPS35P82673 323 aaKnown RBP10.95□□□□□ -0.66
LRP1-202ENST00000338962 ECT2LQ008S8 904 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 CLCQ05315 142 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 ANKS6Q68DC2 871 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 TXNDC11Q6PKC3 985 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 CHSY3Q70JA7 882 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 ZSWIM9Q86XI8 627 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 GPSM1Q86YR5 675 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 PCDH20Q8N6Y1 951 aaKnown RBP10.95□□□□□ -0.66
LRP1-202ENST00000338962 GRIN3AQ8TCU5 1115 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 DTX3LQ8TDB6 740 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 TRPC4APQ8TEL6 797 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 OTUB2Q96DC9 234 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 SCRN2Q96FV2 425 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 NSUN5Q96P11 429 aaKnown RBP10.95□□□□□ -0.66
LRP1-202ENST00000338962 LYSMD1Q96S90 227 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 FAM83CQ9BQN1 747 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 CIPCQ9C0C6 399 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 CEP44Q9C0F1 390 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 SUV39H2Q9H5I1 410 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 ZDHHC6Q9H6R6 413 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 SPHK2Q9NRA0 654 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 NDE1Q9NXR1 346 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 STX18Q9P2W9 335 aaKnown RBP10.95□□□□□ -0.66
LRP1-202ENST00000338962 CRLS1Q9UJA2 301 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 DENND4AQ7Z401 1863 aa10.95□□□□□ -0.66
LRP1-202ENST00000338962 ATP6AP2A0A1C7CYW4 349 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 STX16-NPEPL1H3BU86 382 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 PPP6CO00743 305 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 GAPDHSO14556 408 aaPredicted RBP10.94□□□□□ -0.66
LRP1-202ENST00000338962 STX16O14662 325 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 SLC9A3R1O14745 358 aaPredicted RBP10.94□□□□□ -0.66
LRP1-202ENST00000338962 AZIN1O14977 448 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 CRCPO75575 148 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 ATP6AP2O75787 350 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 CD1EP15812 388 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 SLC34A1Q06495 639 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 SQLEQ14534 574 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 CDKN3Q16667 212 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 PPP1R3AQ16821 1122 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 GPR33Q49SQ1 333 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 LYPLAL1Q5VWZ2 237 aa10.94□□□□□ -0.66
LRP1-202ENST00000338962 ASTLQ6HA08 431 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms