RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PITPNM1O00562 1244 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CAP1Q01518 475 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 FRMD7Q6ZUT3 714 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 RD3Q7Z3Z2 195 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 OLIG1Q8TAK6 271 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 NKX1-2Q9UD57 310 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CIDEBQ9UHD4 219 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 SGTAO43765 313 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 STC2O76061 302 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 LRATO95237 230 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 SLC35E2BP0CK96 405 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 POU1F1P28069 291 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ALDH9A1P49189 494 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 SKP1P63208 163 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 IL5RAQ01344 420 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF678Q5SXM1 525 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CES5AQ6NT32 575 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 GDPD4Q6W3E5 623 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 TDRD1Q9BXT4 1180 aaKnown RBP6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CERS4Q9HA82 394 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 RECQL5O94762 991 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PRNPP04156 253 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 GTF2H2Q13888 395 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 TTC23Q5W5X9 447 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ARMC6Q6NXE6 501 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 GTF2H2CQ6P1K8 395 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 SNX20Q7Z614 316 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PIM3Q86V86 326 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ING5Q8WYH8 240 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PEX13Q92968 403 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ROPN1LQ96C74 230 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ADPRHL2Q9NX46 363 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 DRGXA6NNA5 263 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 AURKAO14965 403 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 KERAO60938 352 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 MYOCQ99972 504 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 MAGEL2Q9UJ55 1249 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 EME2A4GXA9 379 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 LYNP07948 512 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 SLC8B1Q6J4K2 584 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 TMEM26Q6ZUK4 368 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 CLHC1Q8NHS4 586 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ITCHQ96J02 903 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 OSBPL6Q9BZF3 934 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 IMPAD1Q9NX62 359 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 M0R3G1 203 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 CSF2RAP15509 400 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 RPL5P46777 297 aaKnown RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF549Q6P9A3 640 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 TRIM48Q8IWZ4 208 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 MICU2Q8IYU8 434 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 APOLD1Q96LR9 279 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 NR1H4Q96RI1 486 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 NINQ8N4C6 2090 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 CLDN7O95471 211 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 CLK1P49759 484 aaKnown RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ARSDP51689 593 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 RPL26P61254 145 aaKnown RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 MAGEB10Q96LZ2 347 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 DHRS4Q9BTZ2 278 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 DERL2Q9GZP9 239 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ATAD3AQ9NVI7 634 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 GABBR2O75899 941 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 HERC3Q15034 1050 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 RALGPS2Q86X27 583 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PCDHAC1Q9H158 963 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 OAS1P00973 400 aaKnown RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 DSC1Q08554 894 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PLEKHG6Q3KR16 790 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ADHFE1Q8IWW8 467 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 UBE2E3Q969T4 207 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 NT5C3BQ969T7 300 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 TLE6Q9H808 572 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ZDHHC3Q9NYG2 299 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 AK5Q9Y6K8 562 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 HS6ST1O60243 411 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 EPN2O95208 641 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 CST1P01037 141 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PABPC1P11940 636 aaKnown RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 XRCC1P18887 633 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 HPCAL1P37235 193 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ANXA11P50995 505 aaKnown RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF789Q5FWF6 425 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PRR11Q96HE9 360 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 ZFRQ96KR1 1074 aaKnown RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 CASD1Q96PB1 797 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 CDK15Q96Q40 435 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 C11orf84Q9BUA3 381 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 DUS2Q9NX74 493 aaKnown RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 LCHNA4D1U4 455 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 MTX2O75431 263 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 KIR3DL1P43629 444 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 CCNHP51946 323 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PROSER1Q86XN7 944 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 BBS7Q8IWZ6 715 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 TCAIMQ8N3R3 496 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 KLHDC9Q8NEP7 349 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 KIAA1191Q96A73 305 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 MIEF2Q96C03 454 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 RANBP9Q96S59 729 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms