RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PPP1R8Q12972 351 aaKnown RBP15.94■□□□□ 0.14
NPHP3-201ENST00000337331 PLD1Q13393 1074 aa15.94■□□□□ 0.14
NPHP3-201ENST00000337331 EPGNQ6UW88 154 aa15.94■□□□□ 0.14
NPHP3-201ENST00000337331 RASSF1Q9NS23 344 aa15.94■□□□□ 0.14
NPHP3-201ENST00000337331 FAM105AQ9NUU6 356 aa15.94■□□□□ 0.14
NPHP3-201ENST00000337331 MAT2BQ9NZL9 334 aa15.94■□□□□ 0.14
NPHP3-201ENST00000337331 PAGE1O75459 146 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 PPP2R1BP30154 601 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 TTPAP49638 278 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 TPGS1Q6ZTW0 290 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 USP43Q70EL4 1123 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 HDDC2Q7Z4H3 204 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 CUZD1Q86UP6 607 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 HIPK1Q86Z02 1210 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 TRIM48Q8IWZ4 208 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 TOP6BLQ8N6T0 577 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 MED30Q96HR3 178 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 TEKT5Q96M29 485 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 KCTD15Q96SI1 283 aaPredicted RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 PHOX2BQ99453 314 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 COPS4Q9BT78 406 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 ANKRD60Q9BZ19 345 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 MAFBQ9Y5Q3 323 aaPredicted RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 A0A1W2PRG6 482 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 KPNA3O00505 521 aaPredicted RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 NRP1O14786 923 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 MSI1O43347 362 aaKnown RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 PQBP1O60828 265 aaKnown RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 ABCB7O75027 752 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 CST1P01037 141 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 GMPRP36959 345 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 RPL38P63173 70 aaKnown RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 MRPS6P82932 125 aaKnown RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 IL18R1Q13478 541 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 RNF111Q6ZNA4 994 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 GPRIN3Q6ZVF9 776 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 JPH3Q8WXH2 748 aaPredicted RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 C2CD4BA6NLJ0 364 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 MDM4O15151 490 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 NOBOXO60393 691 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 CD52P31358 61 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 CRYBB1P53674 252 aaPredicted RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 GALNT3Q14435 633 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 PIGGQ5H8A4 983 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 TRIQKQ629K1 86 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 PCDH19Q8TAB3 1148 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 SOCS4Q8WXH5 440 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 RCOR3Q9P2K3 495 aaPredicted RBP15.93■□□□□ 0.14
NPHP3-201ENST00000337331 TEX264Q9Y6I9 313 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 LTN1O94822 1766 aa15.93■□□□□ 0.14
NPHP3-201ENST00000337331 EFCAB9A8MZ26 197 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 G3V2T6 193 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 H0YC42 278 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 AIREO43918 545 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 COX7A2P14406 83 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 DARSP14868 501 aaKnown RBP15.92■□□□□ 0.14
NPHP3-201ENST00000337331 SERPINA4P29622 427 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 EPS8Q12929 822 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 CPSF6Q16630 551 aaKnown RBP eCLIP15.92■□□□□ 0.14
NPHP3-201ENST00000337331 GALNT5Q7Z7M9 940 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 SLC51AQ86UW1 340 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 FAM20CQ8IXL6 584 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 MSANTD3Q96H12 275 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 LHPPQ9H008 270 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 ING3Q9NXR8 418 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 AHSPQ9NZD4 102 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 BCAS1O75363 584 aaPredicted RBP15.92■□□□□ 0.14
NPHP3-201ENST00000337331 GRM3Q14832 879 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 MEP1AQ16819 746 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 PLET1Q6UQ28 207 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 LEMD2Q8NC56 503 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 KBTBD8Q8NFY9 601 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 GPR152Q8TDT2 470 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 CCDC120Q96HB5 630 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 ZNF597Q96LX8 424 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 TRMOQ9BU70 441 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 HSPB11Q9Y547 144 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 CATP04040 527 aaKnown RBP15.92■□□□□ 0.14
NPHP3-201ENST00000337331 RPL9P32969 192 aaKnown RBP15.92■□□□□ 0.14
NPHP3-201ENST00000337331 HECTD3Q5T447 861 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 GPR142Q7Z601 462 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 MPP5Q8N3R9 675 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 PACRGLQ8N7B6 248 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 EMID1Q96A84 441 aaPredicted RBP15.92■□□□□ 0.14
NPHP3-201ENST00000337331 MROQ9BYG7 248 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 RBM38Q9H0Z9 239 aaKnown RBP15.92■□□□□ 0.14
NPHP3-201ENST00000337331 DCSTAMPQ9H295 470 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 GMPPBQ9Y5P6 360 aa15.92■□□□□ 0.14
NPHP3-201ENST00000337331 A0A0J9YYE9 177 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 MANSC4A6NHS7 340 aaPredicted RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 SLC15A5A6NIM6 579 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 PCLAFQ15004 111 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 SH3PXD2AQ5TCZ1 1133 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 KRT78Q8N1N4 520 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 ZNF516Q92618 1163 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 PDZD7Q9H5P4 517 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 KAT8Q9H7Z6 458 aaKnown RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 SUCOQ9UBS9 1254 aaKnown RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 B3GNT3Q9Y2A9 372 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 PCDHB9Q9Y5E1 797 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms