RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ADGRE2Q9UHX3 823 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 EIF3LQ9Y262 564 aaKnown RBP8.15□□□□□ -1.1
HPS4-201ENST00000336873 SPO11Q9Y5K1 396 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 USP3Q9Y6I4 520 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 A0A1W2PPW3 197 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 KPNA3O00505 521 aaPredicted RBP8.15□□□□□ -1.11
HPS4-201ENST00000336873 LDB2O43679 373 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 CAPN15O75808 1086 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 CAPN3P20807 821 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 ELK4P28324 431 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 GABRR2P28476 465 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 CCT8P50990 548 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 POLR2JP52435 117 aaKnown RBP8.15□□□□□ -1.11
HPS4-201ENST00000336873 SFSWAPQ12872 951 aaKnown RBP8.15□□□□□ -1.11
HPS4-201ENST00000336873 CBX2Q14781 532 aaPredicted RBP8.15□□□□□ -1.11
HPS4-201ENST00000336873 SYTL3Q4VX76 610 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 RTP2Q5QGT7 225 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 LDLRAD1Q5T700 205 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 STEAP4Q687X5 459 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 RANBP10Q6VN20 620 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 LRRC8DQ7L1W4 858 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 RBM23Q86U06 439 aaKnown RBP8.15□□□□□ -1.11
HPS4-201ENST00000336873 KBTBD6Q86V97 674 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 SYTL1Q8IYJ3 562 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 PCSK9Q8NBP7 692 aaKnown RBP8.15□□□□□ -1.11
HPS4-201ENST00000336873 CD99L2Q8TCZ2 262 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 MYEOVQ96EZ4 313 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 TCF12Q99081 682 aa8.15□□□□□ -1.11
HPS4-201ENST00000336873 RANBP2P49792 3224 aaKnown RBP8.15□□□□□ -1.11
HPS4-201ENST00000336873 LOC100506127A0A0U1RQW1 187 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 C2orf78A6NCI8 922 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 KPNA5O15131 536 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 ADAM12O43184 909 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 NDST3O95803 873 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 S1PR4O95977 384 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 GLUD1P00367 558 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 STATHP02808 62 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 FESP07332 822 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 COL6A1P12109 1028 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 IMPDH1P20839 514 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 MAGEA3P43357 314 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 RFX3P48380 749 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 CLK1P49759 484 aaKnown RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 NR1H2P55055 460 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 PRKCQQ04759 706 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 BTG3Q14201 252 aaPredicted RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 ZNF423Q2M1K9 1284 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 UNC50Q53HI1 259 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 TECRLQ5HYJ1 363 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 ZNF648Q5T619 568 aaPredicted RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 TMEM26Q6ZUK4 368 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 OTOP2Q7RTS6 562 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 TAS1R1Q7RTX1 841 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 TMEM173Q86WV6 379 aaPredicted RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 HORMAD1Q86X24 394 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 LRRC58Q96CX6 371 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 DACH2Q96NX9 599 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 DEFB118Q96PH6 123 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 FEM1AQ9BSK4 669 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 BDH2Q9BUT1 245 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 ADI1Q9BV57 179 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 C1orf21Q9H246 121 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 FARSBQ9NSD9 589 aaKnown RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 RSL24D1Q9UHA3 163 aaKnown RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 POLG2Q9UHN1 485 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 ZNF490Q9ULM2 529 aaPredicted RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 EVPLLA8MZ36 301 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 GABRDO14764 452 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 B4GALT3O60512 393 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 ZNF7P17097 686 aaPredicted RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 ARNTP27540 789 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 CYP2C18P33260 490 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 GRIA2P42262 883 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 MTHFRP42898 656 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 GSK3BP49841 420 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 PRKAA2P54646 552 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 HERVK_113P63132 956 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 LCP2Q13094 533 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 TUBB3Q13509 450 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 IKBKEQ14164 716 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 GTDC1Q4AE62 458 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 AASDHQ4L235 1098 aaPredicted RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 ZNF678Q5SXM1 525 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 CACHD1Q5VU97 1274 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 ZCCHC8Q6NZY4 707 aaKnown RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 HEATR4Q86WZ0 1026 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 BEND7Q8N7W2 519 aaPredicted RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 C2CD4AQ8NCU7 369 aaPredicted RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 FBXO22Q8NEZ5 403 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 ADCY4Q8NFM4 1077 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 BRSK1Q8TDC3 778 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 ERVK-6Q9BXR3 956 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 FAM192AQ9GZU8 254 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 RNF208Q9H0X6 261 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 PRDM8Q9NQV8 689 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 C5orf42Q9H799 3197 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 C7orf72A4D263 438 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 UBFD1O14562 309 aaKnown RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 ARPC2O15144 300 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 INSIG1O15503 277 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms