RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 CTSKP43235 329 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 MSH2P43246 934 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 C21orf59P57076 290 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 SRP54P61011 504 aaKnown RBP14.91□□□□□ -0.02
CMC1-201ENST00000334841 BMPR2Q13873 1038 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 CASP8Q14790 479 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 KIF19Q2TAC6 998 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 PLA2G4EQ3MJ16 856 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 GRTP1Q5TC63 336 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 PTRHD1Q6GMV3 140 aaKnown RBP14.91□□□□□ -0.02
CMC1-201ENST00000334841 TMEM220Q6QAJ8 160 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 C11orf96Q7Z7L8 435 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 TRAPPC5Q8IUR0 188 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 IQCKQ8N0W5 287 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 KRT222Q8N1A0 295 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 ANKRD7Q92527 254 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 ATOH1Q92858 354 aaPredicted RBP14.91□□□□□ -0.02
CMC1-201ENST00000334841 ZIM3Q96PE6 472 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 KCNH6Q9H252 994 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 ARRDC1-AS1Q9H2J1 176 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 RMI1Q9H9A7 625 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 CYP4F12Q9HCS2 524 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 FSCN3Q9NQT6 498 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 TM7SF3Q9NS93 570 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 EURLQ9NYK6 297 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 SLC24A2Q9UI40 661 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 KLF15Q9UIH9 416 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 MOSPD1Q9UJG1 213 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 ZNF180Q9UJW8 692 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 CORO1CQ9ULV4 474 aaPredicted RBP14.91□□□□□ -0.02
CMC1-201ENST00000334841 ANKRD6Q9Y2G4 727 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 MTO1Q9Y2Z2 717 aaKnown RBP14.91□□□□□ -0.02
CMC1-201ENST00000334841 PCDH15Q96QU1 1955 aa14.91□□□□□ -0.02
CMC1-201ENST00000334841 FAM95CA0A1B0GW59 222 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 SMIM23A6NLE4 172 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 GRID2O43424 1007 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 TCEA3O75764 348 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 CFIP05156 583 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 ITGA2BP08514 1039 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 OR56A5P0C7T3 313 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 SPRP35270 261 aaPredicted RBP14.9□□□□□ -0.02
CMC1-201ENST00000334841 NBL1P41271 181 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 SLCO1A2P46721 670 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 GNPDA1P46926 289 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 CDKN2DP55273 166 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 TIAL1Q01085 375 aaKnown RBP eCLIP14.9□□□□□ -0.02
CMC1-201ENST00000334841 ZNF844Q08AG5 666 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 IFFO1Q0D2I5 559 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 CCDC6Q16204 474 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 DUOXA1Q1HG43 343 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 PYCR3Q53H96 274 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 ZNF542PQ5EBM4 170 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 XKR5Q6UX68 686 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 RABEPKQ7Z6M1 372 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 LRRTM4Q86VH4 590 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 GALNT13Q8IUC8 556 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 SPNS2Q8IVW8 549 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 GPATCH11Q8N954 259 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 SKA1Q96BD8 255 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 FAM136AQ96C01 138 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 ZNF514Q96K75 400 aaPredicted RBP14.9□□□□□ -0.02
CMC1-201ENST00000334841 GPR22Q99680 433 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 OLFM1Q99784 485 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 CCDC77Q9BR77 488 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 TCEAL2Q9H3H9 227 aaPredicted RBP14.9□□□□□ -0.02
CMC1-201ENST00000334841 SMOC1Q9H4F8 434 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 CARS2Q9HA77 564 aaKnown RBP14.9□□□□□ -0.02
CMC1-201ENST00000334841 CAPN10Q9HC96 672 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 PSMC3IPQ9P2W1 217 aaPredicted RBP14.9□□□□□ -0.02
CMC1-201ENST00000334841 GALPQ9UBC7 116 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 GPR34Q9UPC5 381 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 PCDHGA5Q9Y5G8 931 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 SNX11Q9Y5W9 270 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 IKBKGQ9Y6K9 419 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 DGKBQ9Y6T7 804 aa14.9□□□□□ -0.02
CMC1-201ENST00000334841 SPAG17Q6Q759 2223 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 QSOX1O00391 747 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 RASGRP1O95267 797 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 NME1P15531 152 aaKnown RBP14.89□□□□□ -0.03
CMC1-201ENST00000334841 ITGB6P18564 788 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 FDXRP22570 491 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 PBLDP30039 288 aaPredicted RBP14.89□□□□□ -0.03
CMC1-201ENST00000334841 HK3P52790 923 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 PGGT1BP53609 377 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 PPARDQ03181 441 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 GRIK2Q13002 908 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 ZNF658BQ4V348 819 aaPredicted RBP14.89□□□□□ -0.03
CMC1-201ENST00000334841 TRIM61Q5EBN2 209 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 HECTD2Q5U5R9 776 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 FAM45BPQ6NSW5 357 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 SLC23A3Q6PIS1 610 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 ADGRD1Q6QNK2 874 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 RD3Q7Z3Z2 195 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 PIM3Q86V86 326 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 TDRPQ86YL5 185 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 HID1Q8IV36 788 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 PHACTR4Q8IZ21 702 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 OXR1Q8N573 874 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 GIMAP7Q8NHV1 300 aa14.89□□□□□ -0.03
CMC1-201ENST00000334841 CEP76Q8TAP6 659 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms