RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 C2orf80Q0P641 193 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 CHRNA6Q15825 494 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 PITRM1Q5JRX3 1037 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 ANO7Q6IWH7 933 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 FAM43BQ6ZT52 329 aaPredicted RBP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 DLG3Q92796 817 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 APOL4Q9BPW4 351 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 SFXN1Q9H9B4 322 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 TMEM248Q9NWD8 314 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 OSER1Q9NX31 292 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 BACE2Q9Y5Z0 518 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 RGS5O15539 181 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 KDELR3O43731 214 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 KCNA5P22460 613 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 SERINC3Q13530 473 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 PLEKHG6Q3KR16 790 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 PLEKHG4Q58EX7 1191 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 FAM129CQ86XR2 697 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 AADATQ8N5Z0 425 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 NAT8LQ8N9F0 302 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 OR4A15Q8NGL6 344 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 PRICKLE1Q96MT3 831 aaPredicted RBP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 GATA5Q9BWX5 397 aaPredicted RBP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 DNAJC28Q9NX36 388 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 ZDHHC3Q9NYG2 299 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 SLC9A8Q9Y2E8 581 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 AP4S1Q9Y587 144 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 COPG1Q9Y678 874 aaKnown RBP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 A0A0J9YYE9 177 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 TCRBV7S3A2A0A539 114 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 PI15O43692 258 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 PEX1O43933 1283 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 MMP20O60882 483 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 NIPSNAP2O75323 286 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 SERPINB7O75635 380 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 OR4F21O95013 312 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 HIST1H2ABP04908 130 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 ANXA4P09525 319 aaPredicted RBP14.85□□□□□ -0.03
C9orf47-201ENST00000334490 SLC9A4Q6AI14 798 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 HIST3H2AQ7L7L0 130 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 DHDDSQ86SQ9 333 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 DHRSXQ8N5I4 330 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 HIST1H2ACQ93077 130 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 BRINP2Q9C0B6 783 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 PDLIM7Q9NR12 457 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 PHF24Q9UPV7 400 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 FAM20BO75063 409 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 ATP6V1G2O95670 118 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 GNAZP19086 355 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 PPIBP23284 216 aaKnown RBP14.85□□□□□ -0.03
C9orf47-201ENST00000334490 LAPTM5Q13571 262 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 IL23RQ5VWK5 629 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 GPR141Q7Z602 305 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 RNF168Q8IYW5 571 aaPredicted RBP14.85□□□□□ -0.03
C9orf47-201ENST00000334490 PTCD3Q96EY7 689 aaKnown RBP14.85□□□□□ -0.03
C9orf47-201ENST00000334490 CEP44Q9C0F1 390 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 EQTNQ9NQ60 294 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 DDX18Q9NVP1 670 aaKnown RBP14.85□□□□□ -0.03
C9orf47-201ENST00000334490 MFHAS1Q9Y4C4 1052 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 A0A0D9SEW6 157 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 SRRM3A6NNA2 597 aaPredicted RBP14.85□□□□□ -0.03
C9orf47-201ENST00000334490 CHURC1-FNTBB4DL54 471 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 SLC6A2P23975 617 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 BUD31P41223 144 aaPredicted RBP14.85□□□□□ -0.03
C9orf47-201ENST00000334490 PITX1P78337 314 aaPredicted RBP14.85□□□□□ -0.03
C9orf47-201ENST00000334490 PEBP4Q96S96 227 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 ZSCAN5AQ9BUG6 496 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 NKX2-4Q9H2Z4 354 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 SEMA3GQ9NS98 782 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 MTRRQ9UBK8 725 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 PRR5-ARHGAP8B1AHC4 643 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 SLC28A2O43868 658 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 CAPN1P07384 714 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 CA3P07451 260 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 VIPR1P32241 457 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 ASMTP46597 345 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 SLC7A2P52569 658 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 NUP107P57740 925 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 ARHGAP8P85298 464 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 TPRG1Q6ZUI0 275 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 RNF44Q7L0R7 432 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 SPATA19Q7Z5L4 167 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 ADAMTS15Q8TE58 950 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 METTL21AQ8WXB1 218 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 EPB41L4BQ9H329 900 aa14.85□□□□□ -0.03
C9orf47-201ENST00000334490 ZNF840PA6NDX5 716 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 TRIM38O00635 465 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 NRP2O60462 931 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 PRAMEF11O60813 436 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 SIN3BO75182 1162 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 IDH2P48735 452 aaKnown RBP14.84□□□□□ -0.03
C9orf47-201ENST00000334490 ZNF132P52740 706 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 PAQR3Q6TCH7 311 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 SETD9Q8NE22 299 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 ZCCHC10Q8TBK6 192 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 TBC1D10AQ9BXI6 508 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 CLDN4O14493 209 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 AP3D1O14617 1153 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 AMZ1Q400G9 498 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms