RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 LIPEQ05469 1076 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 DEF8Q6ZN54 512 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 EPHX4Q8IUS5 362 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 LRTOMTQ8WZ04 291 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 MTERF3Q96E29 417 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 OR52B2Q96RD2 323 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 FAIM2Q9BWQ8 316 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 MRPS26Q9BYN8 205 aaKnown RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 ARMC7Q9H6L4 198 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 ATP6V1HQ9UI12 483 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 LOC100506127A0A0U1RQW1 187 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 GABRDO14764 452 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 NDUFB5O43674 189 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 ZBTB11O95625 1053 aaPredicted RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 UQCRBP14927 111 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 GSTT1P30711 240 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 CCR10P46092 362 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 MANFP55145 182 aaKnown RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 PPIGQ13427 754 aaKnown RBP eCLIP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 PRR23CQ6ZRP0 262 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 EIF3MQ7L2H7 374 aaKnown RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 AADATQ8N5Z0 425 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 TIFAQ96CG3 184 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 INTS10Q9NVR2 710 aaKnown RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 TAS2R1Q9NYW7 299 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 IKZF3Q9UKT9 509 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 LYVE1Q9Y5Y7 322 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 NHSL1Q5SYE7 1610 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 IGKV6-21A0A0C4DH24 114 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 BMP10O95393 424 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 NFATC1O95644 943 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 IFNA16P05015 189 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 ZNF865P0CJ78 1059 aaPredicted RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 OGNP20774 298 aaKnown RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 ARSIQ5FYB1 569 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 COLGALT2Q8IYK4 626 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 OR2T34Q8NGX1 318 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 OR2T3Q8NH03 318 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 CDKN2AIPNLQ96HQ2 116 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 PRRG3Q9BZD7 231 aa12.88□□□□□ -0.35
VSTM4-202ENST00000332853 RPL26L1Q9UNX3 145 aaKnown RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 MYO5AQ9Y4I1 1855 aaKnown RBP12.88□□□□□ -0.35
VSTM4-202ENST00000332853 MAT2AP31153 395 aaKnown RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 ZC3HC1Q86WB0 502 aaKnown RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 PHYKPLQ8IUZ5 450 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 SIGLEC10Q96LC7 697 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 VPS35Q96QK1 796 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 SLC28A3Q9HAS3 691 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 CNOT6Q9ULM6 557 aaKnown RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 CACNB4O00305 520 aaPredicted RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 PEX2P28328 305 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 CHIT1Q13231 466 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 METTL21CQ5VZV1 264 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 C17orf64Q86WR6 236 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 OR10T2Q8NGX3 314 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 SLC28A2O43868 658 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 ESR1P03372 595 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 HTR1BP28222 390 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 GKP32189 559 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 SF1Q15637 639 aaKnown RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 GSTA3Q16772 222 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 UBAP2Q5T6F2 1119 aaKnown RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 B3GNT9Q6UX72 402 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 MAMDC4Q6UXC1 1216 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 CNTD1Q8N815 330 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 ZNF540Q8NDQ6 660 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 ZBED3Q96IU2 234 aaPredicted RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 MCMBPQ9BTE3 642 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 OSBPL11Q9BXB4 747 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 OGDHLQ9ULD0 1010 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 TOGARAM1Q9Y4F4 1720 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 UNCXA6NJT0 531 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 C16orf62Q7Z3J2 963 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 TP53INP2Q8IXH6 220 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 FAM47BQ8NA70 645 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 PHF10Q8WUB8 498 aaKnown RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 NAT14Q8WUY8 206 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 PYCR2Q96C36 320 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 MFSD1Q9H3U5 465 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 VRTNQ9H8Y1 702 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 POLR1BQ9H9Y6 1135 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 USP29Q9HBJ7 922 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 EQTNQ9NQ60 294 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 ARHGEF3Q9NR81 526 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 MYL12BO14950 172 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 SLC6A2P23975 617 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 ECHS1P30084 290 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 TLX1P31314 330 aaPredicted RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 BUD31P41223 144 aaPredicted RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 TPGS2Q68CL5 300 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 FCRL3Q96P31 734 aaPredicted RBP12.87□□□□□ -0.35
VSTM4-202ENST00000332853 ALG2Q9H553 416 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 MAGEL2Q9UJ55 1249 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 SLC9A8Q9Y2E8 581 aa12.87□□□□□ -0.35
VSTM4-202ENST00000332853 A0A088AWK7 358 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 ZNF10P21506 573 aaPredicted RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 ANXA8L1Q5VT79 327 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 CHMP1BQ7LBR1 199 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms