RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 NFATC2Q13469 925 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 GK3PQ14409 553 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 PABPC1LQ4VXU2 614 aaKnown RBP14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 C6orf52Q5T4I8 152 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 OGFOD2Q6N063 350 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 LETMD1Q6P1Q0 360 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 SBSNQ6UWP8 590 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 ITIH5Q86UX2 942 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 ZSWIM9Q86XI8 627 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 CATSPER1Q8NEC5 780 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 DIS3LQ8TF46 1054 aaKnown RBP14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 GBP5Q96PP8 586 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 C17orf80Q9BSJ5 609 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 SMG9Q9H0W8 520 aaKnown RBP14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 AIG1Q9NVV5 245 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 EGFL7Q9UHF1 273 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 LSM7Q9UK45 103 aaKnown RBP14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 SNX13Q9Y5W8 968 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 MYOFQ9NZM1 2061 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 ZNF821O75541 412 aaPredicted RBP14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 CHN2P52757 468 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 UFM1P61960 85 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 FAM217AQ8IXS0 508 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 SLC15A3Q8IY34 581 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 EME1Q96AY2 570 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 ZNF382Q96SR6 550 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 TLR9Q9NR96 1032 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 TMEM39AQ9NV64 488 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 CMTM6Q9NX76 183 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 NUDT4Q9NZJ9 180 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 ABCD2Q9UBJ2 740 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 PCDHB1Q9Y5F3 818 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 ASPDHA6ND91 283 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 HTRA2O43464 458 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 TGM5O43548 720 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 DENRO43583 198 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 BNIP3LO60238 219 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 TRIM16O95361 564 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 GUCA1CO95843 209 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 CAPNS1P04632 268 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 ZNF7P17097 686 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 BPIP17213 487 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 LAG3P18627 525 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 SLC6A2P23975 617 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 CTSOP43234 321 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 ZFP36L2P47974 494 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 STK19P49842 368 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 HTR6P50406 440 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 RPL26P61254 145 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 GRM2Q14416 872 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 NRF1Q16656 503 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 DGKKQ5KSL6 1271 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 CERS6Q6ZMG9 384 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 SPATA19Q7Z5L4 167 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 AMIGO2Q86SJ2 522 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 TSPAN33Q86UF1 283 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 ST13P4Q8IZP2 240 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 MARVELD2Q8N4S9 558 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 MRPS31Q92665 395 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 LRRC58Q96CX6 371 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 CNBD2Q96M20 576 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 TOX2Q96NM4 488 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 HOPXQ9BPY8 73 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 NSUN3Q9H649 340 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 SLC24A3Q9HC58 644 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 INTS6Q9UL03 887 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 SH3BP1Q9Y3L3 701 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 PIM1P11309 404 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 SLC7A1P30825 629 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 GRIA2P42262 883 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 CCNHP51946 323 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 CDKN3Q16667 212 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 MTX3Q5HYI7 312 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 GOLGA7Q7Z5G4 137 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 SNX20Q7Z614 316 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 MINDY1Q8N5J2 469 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 FNDC5Q8NAU1 212 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 GRIN3AQ8TCU5 1115 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 CANT1Q8WVQ1 401 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 ACDQ96AP0 544 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 CNOT6Q9ULM6 557 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 RAB26Q9ULW5 256 aa14.67□□□□□ -0.06
CLCNKA-201ENST00000331433 A0A1W2PRU2 124 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 ENO4A6NNW6 628 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 FFAR2O15552 330 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 KATNA1O75449 491 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 SLC25A14O95258 325 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 CAPN1P07384 714 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 CNPP09543 421 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 HSPA8P11142 646 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 ZNF26P17031 533 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 ITGALP20701 1170 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 CASP2P42575 452 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 KCNK10P57789 538 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 NAA20P61599 178 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 RCAN2Q14206 197 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 CHRNA6Q15825 494 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 PLEKHG6Q3KR16 790 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 PAGE3Q5JUK9 113 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 HABP4Q5JVS0 413 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms