RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ATP13A3Q9H7F0 1226 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 NTN4Q9HB63 628 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SARS2Q9NP81 518 aaKnown RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 RNF112Q9ULX5 631 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 A0A1W2PP18 115 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 ADM5C9JUS6 153 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SNX2O60749 519 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SLC22A3O75751 556 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 DLGAP3O95886 979 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 CST1P01037 141 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 ITGB6P18564 788 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 POLR2JP52435 117 aaKnown RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 NCS1P62166 190 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 GRSF1Q12849 480 aaKnown RBP eCLIP7.81□□□□□ -1.16
VMA21-201ENST00000330374 KCNAB2Q13303 367 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SIM2Q14190 667 aaPredicted RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 DCAF4L1Q3SXM0 396 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 AASDHQ4L235 1098 aaPredicted RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 ARSJQ5FYB0 599 aaPredicted RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 C6orf141Q5SZD1 244 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 PAGE2Q7Z2X7 111 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 RBM23Q86U06 439 aaKnown RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 CILP2Q8IUL8 1156 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 CHPFQ8IZ52 775 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SCAMP5Q8TAC9 235 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 HASPINQ8TF76 798 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 STARD8Q92502 1023 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 FCRL5Q96RD9 977 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 FEM1AQ9BSK4 669 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 NFKBIZQ9BYH8 718 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 EHD1Q9H4M9 534 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 ENTPD7Q9NQZ7 604 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 MRGBPQ9NV56 204 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 IQCA1LA6NCM1 817 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 C16orf96A6NNT2 1141 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 MEIS3P2A8K0S8 358 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 PIRO00625 290 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 PSMD3O43242 534 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 JRKO75564 520 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 FTH1P02794 183 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 HTR1AP08908 422 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SERPINH1P50454 418 aaKnown RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 ALDH3A2P51648 485 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 ZBTB6Q15916 424 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 DPY19L1Q2PZI1 675 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SV2CQ496J9 727 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 ATP6AP1LQ52LC2 224 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 UGT3A1Q6NUS8 523 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 NOTUMQ6P988 496 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 USP51Q70EK9 711 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 FBXO39Q8N4B4 442 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 UBXN10Q96LJ8 280 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 DACH2Q96NX9 599 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 RHNO1Q9BSD3 238 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 MAF1Q9H063 256 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SDR39U1Q9NRG7 319 aaPredicted RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 MAFKO60675 156 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 NDUFS2O75306 463 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 KATNA1O75449 491 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 BMP4P12644 408 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ARHGAP1Q07960 439 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 PWP1Q13610 501 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 TSNQ15631 228 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 PROX2Q3B8N5 592 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 MOB2Q70IA6 237 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ZMIZ2Q8NF64 920 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 OR13J1Q8NGT2 312 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 CALML6Q8TD86 181 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 RPL3LQ92901 407 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 NTAN1Q96AB6 310 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 NODALQ96S42 347 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 TUBA1CQ9BQE3 449 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 CARS2Q9HA77 564 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 FAM118AQ9NWS6 357 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 TMED5Q9Y3A6 229 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ARL5AQ9Y689 179 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 TRIM64A6NGJ6 449 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 PAGE1O75459 146 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 CD4P01730 458 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ALPLP05186 524 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 CD1DP15813 335 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 IL12AP29459 219 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 SERPINB1P30740 379 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 FMO4P31512 558 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 PIK3CGP48736 1102 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 AFF1P51825 1210 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 FAM98BQ52LJ0 330 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 GTF2IRD2BQ6EKJ0 949 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 SLC16A12Q6ZSM3 486 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 GTF2IRD2Q86UP8 949 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 HEATR4Q86WZ0 1026 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ARHGAP12Q8IWW6 846 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ARRDC4Q8NCT1 418 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 CHDHQ8NE62 594 aaPredicted RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 MYOCQ99972 504 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 TRMOQ9BU70 441 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 MROQ9BYG7 248 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 TRIM54Q9BYV2 358 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 AMBRA1Q9C0C7 1298 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms