RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 CD70P32970 193 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 VIPR2P41587 438 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 RIPK1Q13546 671 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 PLCL1Q15111 1095 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 GRAMD4Q6IC98 578 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 TMPRSS11BQ86T26 416 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.85■□□□□ 0.13
SYNM-201ENST00000328642 ZBTB2Q8N680 514 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 LRTOMTQ8WZ04 291 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 MYEOVQ96EZ4 313 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 SUV39H2Q9H5I1 410 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 C11orf49Q9H6J7 331 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 LEFTY2O00292 366 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 CLOCKO15516 846 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 HOXB8P17481 243 aaPredicted RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 PSMD8P48556 350 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 AQP4P55087 323 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 LMAN2Q12907 356 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 REP15Q6BDI9 236 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 PSRC1Q6PGN9 363 aaPredicted RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 TIFABQ6ZNK6 161 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 RAVER1Q8IY67 606 aaKnown RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 AARSD1Q9BTE6 412 aaKnown RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 FAM32AQ9Y421 112 aaKnown RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 ATXN2Q99700 1313 aaKnown RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 PLK4O00444 970 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 TGM5O43548 720 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 GBAP04062 536 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 CHI3L1P36222 383 aaPredicted RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 SPESP1Q6UW49 350 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 ATG16L2Q8NAA4 619 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 OR2AP1Q8NGE2 309 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 BADQ92934 168 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 C1orf74Q96LT6 269 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 TDP1Q9NUW8 608 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 COL11A1P12107 1806 aaPredicted RBP15.84■□□□□ 0.13
SYNM-201ENST00000328642 SLC31A1O15431 190 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 HS6ST1O60243 411 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 LDLRP01130 860 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 GTF2H2Q13888 395 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 DSC3Q14574 896 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 PLEKHG6Q3KR16 790 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 TPGS2Q68CL5 300 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 GTF2H2CQ6P1K8 395 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 MMAAQ8IVH4 418 aaKnown RBP15.84■□□□□ 0.13
SYNM-201ENST00000328642 ZNF614Q8N883 585 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 LINC01599Q8WXQ3 324 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 IFRD1O00458 451 aaPredicted RBP15.84■□□□□ 0.13
SYNM-201ENST00000328642 LDB2O43679 373 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 IMPDH1P20839 514 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 ATP6V1C1P21283 382 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 CTSOP43234 321 aaPredicted RBP15.84■□□□□ 0.13
SYNM-201ENST00000328642 FOLH1Q04609 750 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 GRB7Q14451 532 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 DMC1Q14565 340 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 XKR4Q5GH76 650 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 TMEM220Q6QAJ8 160 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 KIAA1324Q6UXG2 1013 aaKnown RBP15.84■□□□□ 0.13
SYNM-201ENST00000328642 SLC28A3Q9HAS3 691 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 KCNK13Q9HB14 408 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.84■□□□□ 0.13
SYNM-201ENST00000328642 IMP3Q9NV31 184 aaKnown RBP15.84■□□□□ 0.13
SYNM-201ENST00000328642 CABIN1Q9Y6J0 2220 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 ZNF487B1APH4 448 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 KDELR3O43731 214 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 ALOX15P16050 662 aaPredicted RBP15.84■□□□□ 0.13
SYNM-201ENST00000328642 MTA1Q13330 715 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 RABL3Q5HYI8 236 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 STEAP4Q687X5 459 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 NADSYN1Q6IA69 706 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 EPGNQ6UW88 154 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 COL26A1Q96A83 441 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 TCEAL4Q96EI5 215 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 RIOK2Q9BVS4 552 aaKnown RBP15.84■□□□□ 0.13
SYNM-201ENST00000328642 ARMC7Q9H6L4 198 aa15.84■□□□□ 0.13
SYNM-201ENST00000328642 BRWD1Q9NSI6 2320 aa15.83■□□□□ 0.13
SYNM-201ENST00000328642 PFDN1O60925 122 aa15.83■□□□□ 0.13
SYNM-201ENST00000328642 PREPP48147 710 aa15.83■□□□□ 0.13
SYNM-201ENST00000328642 DGKGP49619 791 aa15.83■□□□□ 0.13
SYNM-201ENST00000328642 UTP4Q969X6 686 aaKnown RBP15.83■□□□□ 0.13
SYNM-201ENST00000328642 RHBGQ9H310 441 aa15.83■□□□□ 0.13
SYNM-201ENST00000328642 B4GALT6Q9UBX8 382 aa15.83■□□□□ 0.13
SYNM-201ENST00000328642 DHRS12A0PJE2 317 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 G3V2L1 256 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 PDLIM1O00151 329 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 POP4O95707 220 aaKnown RBP15.83■□□□□ 0.12
SYNM-201ENST00000328642 ZNF37AP17032 561 aaPredicted RBP15.83■□□□□ 0.12
SYNM-201ENST00000328642 PTGER3P43115 390 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 CCT8P50990 548 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 AP1S1P61966 158 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 HERVK_113P63132 956 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 CHIT1Q13231 466 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 PDK3Q15120 406 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 FAM174BQ3ZCQ3 159 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 OR52B6Q8NGF0 335 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 WBP2Q969T9 261 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 ERVK-6Q9BXR3 956 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 AP4B1Q9Y6B7 739 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 DOCK1Q14185 1865 aa15.83■□□□□ 0.12
SYNM-201ENST00000328642 SEC16AO15027 2179 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms